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Report for CCDS14038.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14038.1 Public Homo sapiens 22 POLDIP3 24 110 108 CCDS HistoryNCBI Gene:84271Re-query CCDS DB by CCDS ID:14038.1Re-query CCDS DB by GeneID:84271See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14038.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252115.10 ENSP00000252115.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252115.10Link to Ensembl Protein Viewer:ENSP00000252115.5Re-query CCDS DB by Nucleotide ID:ENST00000252115Re-query CCDS DB by Protein ID:ENSP00000252115
Original member Current member NCBI NM_032311.5 NP_115687.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032311.5Link to Protein Sequence:NP_115687.2Re-query CCDS DB by Nucleotide ID:NM_032311Re-query CCDS DB by Protein ID:NP_115687Link to BLAST:NP_115687.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115687.2 421 Q9BY77-1 421 100% 0 0

Chromosomal Locations for CCDS 14038.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 42585791 42585968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42587506 42587572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42591955 42592084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42595537 42595614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42596186 42596365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42599698 42599793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42601970 42602056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42602770 42603160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42614799 42614857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1266 nt):
ATGGCGGACATCTCCCTGGACGAACTCATCAGGAAGCGCGGGGCGGCGGCGAAAGGACGGCTTAATGCCA
GACCGGGAGTTGGAGGTGTCCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCAC
AGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGA
GTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGATG
CCAGAGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGC
CCGGGAGAAGATCAGCTTGAAGAGGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTGGGACAGTGACC
CCTGCTCTGAAGCTCACCAAAACCATCCAGGTTCCACAGCAGAAAGCCATGGCACCACTTCATCCCCATC
CTGCCGGAATGAGAATCAATGTTGTCAATAACCACCAGGCCAAACAGAATTTATATGACCTGGATGAAGA
TGATGATGGTATAGCTTCCGTTCCTACTAAACAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCACCAC
ATGGCTGGGCTAAGCAGTTCCAAGCTTTCCATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATG
ATGCATACACAGCTCCTGCTCTCCCTTCCTCTATTCGAACAAAAGCCTTGACCAACATGTCCCGGACACT
GGTGAACAAGGAAGAACCCCCCAAAGAGCTGCCAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCACC
AAGATGACTGTGAATAATCTGCACCCTCGAGTCACTGAGGAGGACATTGTTGAGCTTTTCTGTGTGTGTG
GGGCCCTCAAGCGAGCTCGACTGGTCCATCCTGGGGTAGCGGAGGTGGTGTTTGTGAAAAAGGACGATGC
CATCACCGCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAACCTTCACATG
AATGGGAATGTTATCACCTCAGACCAGCCCATCCTGCTGCGGCTGAGTGACAGCCCATCAATGAAAAAGG
AGAGCGAGCTGCCTCGCAGGGTGAACTCTGCCTCCTCCTCCAACCCCCCTGCCGAAGTGGACCCTGACAC
CATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAAAATCAAG
CTTTGA

Translation (421 aa):
MADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG
VKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVT
PALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQAKQNLYDLDEDDDGIASVPTKQMKFAASGGFLHH
MAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGT
KMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHM
NGNVITSDQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEFKIK
L


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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