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Report for CCDS14034.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14034.1 Public Homo sapiens 22 NFAM1 24 110 108 CCDS HistoryNCBI Gene:150372Re-query CCDS DB by CCDS ID:14034.1Re-query CCDS DB by GeneID:150372See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14034.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329021.10 ENSP00000333680.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329021.10Link to Ensembl Protein Viewer:ENSP00000333680.5Re-query CCDS DB by Nucleotide ID:ENST00000329021Re-query CCDS DB by Protein ID:ENSP00000333680
Original member Current member NCBI NM_145912.8 NP_666017.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145912.8Link to Protein Sequence:NP_666017.1Re-query CCDS DB by Nucleotide ID:NM_145912Re-query CCDS DB by Protein ID:NP_666017Link to BLAST:NP_666017.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666017.1 270 Q8NET5 270 100% 0 0

Chromosomal Locations for CCDS 14034.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 42385161 42385220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42386989 42387078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42397858 42397956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42409435 42409547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42411407 42411736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42432237 42432357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (813 nt):
ATGGAGAACCAGCCTGTGAGGTGGCGGGCCCTGCCAGGCCTCCCACGCCCTCCTGGGCTCCCCGCAGCCC
CCTGGCTCCTCCTTGGCGTGCTGCTGCTGCCCGGGACCCTGCGACTGGCAGGAGGACAGTCAGTGACCCA
CACCGGCCTGCCCATCATGGCCTCCCTGGCCAACACAGCTATCTCCTTCAGCTGCAGGATCACCTATCCA
TACACTCCCCAATTCAAGGTTTTCACAGTCAGCTACTTTCATGAAGATCTCCAGGGACAGAGGAGCCCTA
AGAAGCCAACAAACTGCCACCCTGGACTGGGCACAGAGAACCAGAGCCACACCCTGGACTGCCAGGTCAC
CCTTGTGCTGCCGGGAGCATCGGCCACTGGCACCTACTACTGCTCTGTCCACTGGCCACACTCCACGGTG
AGAGGCAGCGGCACCTTCATCCTGGTCAGAGACGCAGGGTACCGAGAGCCCCCGCAGAGTCCACAGAAGC
TCCTGCTCTTTGGCTTCACCGGCCTCCTGAGTGTCCTGAGTGTAGTGGGCACGGCCCTGCTGCTCTGGAA
CAAGAAGCGGATGCGGGGTCCAGGGAAGGACCCCACCAGGAAGTGCCCAGATCCAAGATCTGCCAGCAGC
CCCAAGCAGCATCCTTCAGAATCTGTCTACACAGCTCTGCAGCGCCGCGAGACCGAGGTCTATGCCTGCA
TCGAGAATGAGGATGGCAGCTCACCCACCGCCAAGCAGAGCCCCCTCTCCCAGGAGAGACCGCATAGATT
CGAAGATGATGGCGAACTTAACCTGGTCTATGAAAATCTCTAG

Translation (270 aa):
MENQPVRWRALPGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQSVTHTGLPIMASLANTAISFSCRITYP
YTPQFKVFTVSYFHEDLQGQRSPKKPTNCHPGLGTENQSHTLDCQVTLVLPGASATGTYYCSVHWPHSTV
RGSGTFILVRDAGYREPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASS
PKQHPSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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