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Report for CCDS13962.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13962.1 Public Homo sapiens 22 C22orf23 24 110 108 CCDS HistoryNCBI Gene:84645Re-query CCDS DB by CCDS ID:13962.1Re-query CCDS DB by GeneID:84645See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13962.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000249079.6 ENSP00000249079.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000249079.6Link to Ensembl Protein Viewer:ENSP00000249079.2Re-query CCDS DB by Nucleotide ID:ENST00000249079Re-query CCDS DB by Protein ID:ENSP00000249079
Original member Current member EBI ENST00000403026.5 ENSP00000384618.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403026.5Link to Ensembl Protein Viewer:ENSP00000384618.1Re-query CCDS DB by Nucleotide ID:ENST00000403026Re-query CCDS DB by Protein ID:ENSP00000384618
Original member Current member EBI ENST00000403305.6 ENSP00000384667.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000403305.6Link to Ensembl Protein Viewer:ENSP00000384667.1Re-query CCDS DB by Nucleotide ID:ENST00000403305Re-query CCDS DB by Protein ID:ENSP00000384667
Original member Current member NCBI NM_032561.5 NP_115950.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032561.5Link to Protein Sequence:NP_115950.3Re-query CCDS DB by Nucleotide ID:NM_032561Re-query CCDS DB by Protein ID:NP_115950Link to BLAST:NP_115950.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115950.3 217 Q9BZE7 217 100% 0 0

Chromosomal Locations for CCDS 13962.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37944175 37944246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37944417 37944517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37945042 37945173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37947281 37947463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37951460 37951522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37953047 37953149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCGCCGCCCCAAGACCATCA
CTTACACCCCGGGGACCTGCGAGCTGCTCAGAGTGATGATGAAGGAATCCAAACTGACGAACATCCAGCA
GCGCCACATCATGGACATCATGAAAAGAGGAGATGCTTTGCCCCTACAGTGCAGCCCAACATCCAGCCAG
AGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCATCTACCTGCCTCCCATCCTCGCAGCCCGTCCCCACC
TCCGGCCTGCCAACATGTGTCAAGCCAATGGGGCCTACAGCCGGGAGCAGTTCAAGCCTCAAGCCACCAG
GGATTTGGAGAAGGAGAAACAAAGACTCCAAAATATCTTTGCCACAGGGAAGGACATGGAGGAACGGAAA
AGAAAGGCCCCTCCTGCACGACAGAAGGCTCCAGCCCCTGAGCTAGACCGATTTGAAGAGCTGGTGAAGG
AAATCCAGGAGAGGAAAGAATTCCTGGCTGACATGGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAAT
CATCCTTGCTGAAATCTCCCAGAAACTCCGGGAAATGGAAGACATTGACCACAGAAGGAGTGAGGAACTT
AGGAAGGGTCTTGCCACCACTTAA

Translation (217 aa):
MASQKQMEVVTKGTGFRRRPKTITYTPGTCELLRVMMKESKLTNIQQRHIMDIMKRGDALPLQCSPTSSQ
RVLPSKQIASPIYLPPILAARPHLRPANMCQANGAYSREQFKPQATRDLEKEKQRLQNIFATGKDMEERK
RKAPPARQKAPAPELDRFEELVKEIQERKEFLADMEALGQGKQYRGIILAEISQKLREMEDIDHRRSEEL
RKGLATT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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