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Report for CCDS1396.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1396.1 Public Homo sapiens 1 ATP6V1G3 24 110 108 CCDS HistoryNCBI Gene:127124Re-query CCDS DB by CCDS ID:1396.1Re-query CCDS DB by GeneID:127124See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1396.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309309.11 ENSP00000309574.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000309309.11Link to Ensembl Protein Viewer:ENSP00000309574.7Re-query CCDS DB by Nucleotide ID:ENST00000309309Re-query CCDS DB by Protein ID:ENSP00000309574
Original member Current member NCBI NM_001376863.1 NP_001363792.1 Accepted alive Link to Nucleotide Sequence:NM_001376863.1Link to Protein Sequence:NP_001363792.1Re-query CCDS DB by Nucleotide ID:NM_001376863Re-query CCDS DB by Protein ID:NP_001363792Link to BLAST:NP_001363792.1
Original member Current member NCBI NM_133326.2 NP_579872.1 Accepted alive Link to Nucleotide Sequence:NM_133326.2Link to Protein Sequence:NP_579872.1Re-query CCDS DB by Nucleotide ID:NM_133326Re-query CCDS DB by Protein ID:NP_579872Link to BLAST:NP_579872.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363792.1 59 Q96LB4-3 59 100% 0 0
NP_579872.1 59 Q96LB4-3 59 100% 0 0

Chromosomal Locations for CCDS 1396.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 198529130 198529181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 198536679 198536724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 198540569 198540650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (180 nt):
ATGACAAGCCAGTCTCAGGGGATCCACCAGCTTCTTCAGGCAGAAAAACGGGCCAAGGACAAGCTAGAGG
AAGCCAAGAAGATTCTGCATCTACTTTTCCTAAAACGAAGAGACTGGGACTGCTTCTGGAAAAGGAAAGC
GATTGAAGCAAGCCAAGGAGGAAGCAATGGTAGAAATTGA

Translation (59 aa):
MTSQSQGIHQLLQAEKRAKDKLEEAKKILHLLFLKRRDWDCFWKRKAIEASQGGSNGRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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