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Report for CCDS13948.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13948.1 Public Homo sapiens 22 CARD10 24 110 108 CCDS HistoryNCBI Gene:29775Re-query CCDS DB by CCDS ID:13948.1Re-query CCDS DB by GeneID:29775See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13948.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251973.10 ENSP00000251973.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251973.10Link to Ensembl Protein Viewer:ENSP00000251973.5Re-query CCDS DB by Nucleotide ID:ENST00000251973Re-query CCDS DB by Protein ID:ENSP00000251973
Original member Current member EBI ENST00000403299.5 ENSP00000384570.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403299.5Link to Ensembl Protein Viewer:ENSP00000384570.1Re-query CCDS DB by Nucleotide ID:ENST00000403299Re-query CCDS DB by Protein ID:ENSP00000384570
Original member Current member NCBI NM_014550.4 NP_055365.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014550.4Link to Protein Sequence:NP_055365.2Re-query CCDS DB by Nucleotide ID:NM_014550Re-query CCDS DB by Protein ID:NP_055365Link to BLAST:NP_055365.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055365.2 1032 Q9BWT7-1 1032 100% 0 0

Chromosomal Locations for CCDS 13948.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37491159 37491393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37491755 37491867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37492435 37492550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37492644 37492802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37494086 37494188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37495517 37495586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37495760 37496003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37496449 37496560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37497019 37497178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37502602 37502725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37503185 37503213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37504186 37504301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37504635 37504769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37506192 37506383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37507829 37507954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37508527 37508682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37510212 37510421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37515973 37516298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37517971 37518108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37518966 37519200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3099 nt):
ATGCCGGGCCGGGCGGAGGCGGGGGAGGCCGAGGAGGAGGCCGGGGCCGGCTCGGGGTCTGAGGCGGAGG
AGGACGCGCTGTGGGAGCGAATCGAGGGCGTCCGGCATCGGCTGGCTCGCGCCCTGAACCCGGCCAAGCT
CACGCCGTATCTGCGCCAGTGCCGGGTCATCGACGAGCAGGACGAGGAGGAGGTGCTGAGCACCTACCGC
TTCCCGTGCCGCGTCAACCGCACCGGGCGCCTGATGGACATCTTGCGCTGCCGTGGCAAGAGGGGCTATG
AGGCCTTCCTGGAAGCCCTGGAGTTCTACTACCCCGAACACTTCACGCTGCTCACGGGCCAGGAACCCGC
CCAGCGCTGCTCCATGATCCTCGATGAGGAGGGGCCTGAGGGCCTGACCCAATTCTTGATGACAGAGGTG
CGACGGCTGCGGGAAGCTCGCAAGAGCCAGCTGCAGCGGGAGCAGCAACTGCAGGCCCGGGGCCGGGTGC
TCGAGGAGGAGCGGGCAGGGCTGGAGCAGCGGCTGCGGGACCAGCAGCAGGCTCAGGAGCGCTGTCAACG
GCTGCGGGAGGACTGGGAGGCGGGCAGCCTGGAGCTGCTGCGGCTCAAGGATGAGAACTACATGATCGCC
ATGCGCCTGGCACAGCTCAGTGAGGAGAAGAACTCGGCTGTACTTCGCAGCCGTGACCTGCAGCTGGCGG
TGGATCAGCTCAAGCTCAAAGTGAGTCGGCTGGAGGAAGAGTGTGCACTGCTTCGAAGGGCCAGGGGCCC
GCCCCCTGGGGCAGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGCCAGACAATGTGGACCTTGTC
TCTGAGCTGCGTGCTGAGAACCAGCGGCTGACGGCGTCACTGCGGGAGTTGCAGGAGGGCCTGCAGCAGG
AGGCGAGCCGGCCGGGGGCCCCGGGCTCCGAGCGCATCCTGCTGGACATCCTAGAGCATGACTGGCGGGA
GGCGCAGGACAGCAGGCAGGAGCTGTGCCAGAAGCTGCATGCCGTGCAGGGGGAGCTGCAGTGGGCCGAG
GAGCTGCGCGACCAGTACCTGCAGGAGATGGAAGACCTGCGGCTCAAGCACCGCACGCTGCAGAAGGACT
GTGACCTGTACAAGCACCGCATGGCCACTGTCCTGGCCCAACTGGAGGAGATTGAGAAGGAGCGAGACCA
GGCCATCCAGAGCCGTGACCGGATCCAGTTGCAGTACTCACAGAGCCTCATCGAGAAGGACCAGTACCGC
AAGCAGGTGCGGGGCCTGGAGGCGGAGCGGGATGAGCTGCTGACAACGCTCACCAGCCTGGAGGGCACCA
AGGCTCTGCTGGAGGTTCAGCTGCAGCGGGCCCAGGGTGGCACCTGCCTCAAGGCCTGTGCCTCCTCCCA
TTCCCTGTGCTCCAACCTCAGCAGCACTTGGAGCCTGAGCGAGTTCCCCTCCCCTCTGGGAGGCCCAGAA
GCAACTGGGGAGGCAGCTGTCATGGGGGGACCTGAGCCTCACAACTCGGAGGAAGCCACAGACAGTGAAA
AGGAGATCAATCGGCTCTCCATCCTGCCCTTCCCCCCCAGTGCCGGCTCCATCCTCCGCCGGCAGCGTGA
GGAAGACCCCGCACCCCCTAAGAGATCCTTCAGCAGCATGTCAGACATCACAGGGAGTGTGACACTTAAG
CCCTGGTCCCCTGGCCTCTCTTCGTCCTCATCCTCTGACAGCGTGTGGCCTTTGGGAAAGCCGGAAGGCC
TCCTGGCTCGGGGCTGTGGCCTGGACTTCCTCAACAGGTCTCTGGCTATTCGGGTGTCTGGCCGGAGCCC
CCCAGGGGGCCCAGAGCCGCAGGACAAGGGACCAGATGGACTGTCGTTTTATGGGGACAGATGGTCTGGG
GCTGTGGTGCGCAGGGTGCTGTCTGGGCCTGGGTCCGCCAGGATGGAACCAAGAGAGCAAAGGGTGGAAG
CTGCTGGTCTGGAGGGGGCGTGCCTGGAAGCCGAGGCCCAGCAGAGAACCTTGCTCTGGAATCAGGGGTC
CACACTCCCCTCCCTGATGGACTCGAAGGCCTGCCAGTCCTTCCACGAGGCCCTAGAAGCCTGGGCAAAG
GGACCAGGTGCCGAGCCCTTCTACATTCGTGCCAACCTCACCTTGCCTGAGAGGGCAGATCCCCATGCCC
TTTGCGTGAAAGCCCAAGAGATCCTTCGACTGGTGGACTCGGCATACAAGCGGAGGCAGGAATGGTTCTG
CACCCGGGTTGACCCCCTCACTCTGCGGGACCTGGACCGGGGCACCGTGCCCAATTATCAGAGAGCCCAG
CAGCTCCTAGAAGTTCAGGAGAAATGCCTGCCCTCCAGCCGGCACCGAGGCCCCCGCAGTAATCTGAAGA
AGAGAGCCCTGGACCAGCTGCGGCTGGTGAGGCCCAAGCCCGTGGGGGCGCCTGCAGGGGACTCCCCGGA
TCAGCTGCTGCTGGAGCCCTGTGCAGAGCCGGAGCGGAGCCTCAGACCCTACAGTTTGGTGCGGCCGCTA
CTGGTGTCTGCCCTGCGGCCCGTGGTGCTGTTGCCTGAGTGCCTGGCGCCCCGGCTCATCCGTAACCTGC
TAGACCTGCCCAGCTCCCGGCTGGACTTCCAAGTGTGCCCAGCGGAAAGCCTCTCTGGGGAGGAACTGTG
CCCATCCTCAGCGCCTGGAGCCCCCAAGGCTCAGCCTGCCACCCCTGGGCTAGGCAGCAGGATCCGGGCC
ATCCAGGAGTCTGTTGGGAAGAAGCACTGCCTGCTGGAGCTGGGTGCTCGGGGTGTGCGGGAGCTGGTGC
AGAACGAGATCTACCCCATCGTCATCCACGTGGAGGTGACTGAGAAGAATGTCCGGGAAGTCAGGGGTCT
GCTGGGCCGGCCGGGCTGGCGGGACTCAGAGCTGCTGCGGCAGTGCCGTGGCTCAGAGCAGGTGCTCTGG
GGGCTGCCCTGCTCCTGGGTGCAGGTGCCCGCCCATGAGTGGGGACACGCAGAGGAGCTGGCCAAGGTGG
TGCGCGGCCGCATCCTGCAGGAGCAGGCCCGCCTCGTGTGGGTGGAGTGCGGCAGCAGCAGAGGCTGCCC
CAGCAGCAGTGAGGCCTGA

Translation (1032 aa):
MPGRAEAGEAEEEAGAGSGSEAEEDALWERIEGVRHRLARALNPAKLTPYLRQCRVIDEQDEEEVLSTYR
FPCRVNRTGRLMDILRCRGKRGYEAFLEALEFYYPEHFTLLTGQEPAQRCSMILDEEGPEGLTQFLMTEV
RRLREARKSQLQREQQLQARGRVLEEERAGLEQRLRDQQQAQERCQRLREDWEAGSLELLRLKDENYMIA
MRLAQLSEEKNSAVLRSRDLQLAVDQLKLKVSRLEEECALLRRARGPPPGAEEKEKEKEKEKEPDNVDLV
SELRAENQRLTASLRELQEGLQQEASRPGAPGSERILLDILEHDWREAQDSRQELCQKLHAVQGELQWAE
ELRDQYLQEMEDLRLKHRTLQKDCDLYKHRMATVLAQLEEIEKERDQAIQSRDRIQLQYSQSLIEKDQYR
KQVRGLEAERDELLTTLTSLEGTKALLEVQLQRAQGGTCLKACASSHSLCSNLSSTWSLSEFPSPLGGPE
ATGEAAVMGGPEPHNSEEATDSEKEINRLSILPFPPSAGSILRRQREEDPAPPKRSFSSMSDITGSVTLK
PWSPGLSSSSSSDSVWPLGKPEGLLARGCGLDFLNRSLAIRVSGRSPPGGPEPQDKGPDGLSFYGDRWSG
AVVRRVLSGPGSARMEPREQRVEAAGLEGACLEAEAQQRTLLWNQGSTLPSLMDSKACQSFHEALEAWAK
GPGAEPFYIRANLTLPERADPHALCVKAQEILRLVDSAYKRRQEWFCTRVDPLTLRDLDRGTVPNYQRAQ
QLLEVQEKCLPSSRHRGPRSNLKKRALDQLRLVRPKPVGAPAGDSPDQLLLEPCAEPERSLRPYSLVRPL
LVSALRPVVLLPECLAPRLIRNLLDLPSSRLDFQVCPAESLSGEELCPSSAPGAPKAQPATPGLGSRIRA
IQESVGKKHCLLELGARGVRELVQNEIYPIVIHVEVTEKNVREVRGLLGRPGWRDSELLRQCRGSEQVLW
GLPCSWVQVPAHEWGHAEELAKVVRGRILQEQARLVWVECGSSRGCPSSSEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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