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Report for CCDS13897.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13897.1 Public Homo sapiens 22 DRG1 24 110 108 CCDS HistoryNCBI Gene:4733Re-query CCDS DB by CCDS ID:13897.1Re-query CCDS DB by GeneID:4733See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13897.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331457.9 ENSP00000329715.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331457.9Link to Ensembl Protein Viewer:ENSP00000329715.4Re-query CCDS DB by Nucleotide ID:ENST00000331457Re-query CCDS DB by Protein ID:ENSP00000329715
Original member Current member NCBI NM_004147.4 NP_004138.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004147.4Link to Protein Sequence:NP_004138.1Re-query CCDS DB by Nucleotide ID:NM_004147Re-query CCDS DB by Protein ID:NP_004138Link to BLAST:NP_004138.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004138.1 367 Q9Y295 367 100% 0 0

Chromosomal Locations for CCDS 13897.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 31399684 31399725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31400620 31400743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31403029 31403204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31411012 31411081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31420256 31420425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31423280 31423410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31426615 31426782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31427060 31427182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31433872 31433971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAGATGGCTCGGACTCAAAAGAACAAGGCCA
CAGCACACCACTTAGGGCTGCTTAAGGCTCGTCTTGCTAAGCTTCGTCGAGAACTCATTACTCCAAAGGG
TGGTGGTGGTGGAGGTCCAGGAGAAGGTTTTGATGTGGCCAAGACAGGTGATGCTCGAATTGGATTTGTT
GGTTTTCCATCTGTGGGGAAGTCAACACTGCTTAGTAACCTGGCAGGGGTATATTCTGAGGTGGCAGCCT
ATGAATTCACTACTCTGACCACTGTGCCTGGTGTCATCAGATACAAAGGTGCCAAGATCCAGCTCCTGGA
TCTCCCAGGTATCATTGAAGGTGCCAAGGATGGGAAAGGTAGAGGTCGTCAAGTCATTGCAGTGGCCCGA
ACCTGTAACTTGATCTTGATTGTTCTGGATGTCCTGAAACCTTTGGGACATAAGAAGATAATTGAAAATG
AGCTGGAAGGCTTTGGCATTCGCTTGAACAGCAAACCCCCCAACATTGGCTTTAAGAAGAAGGACAAGGG
AGGCATTAATCTCACAGCCACTTGCCCCCAGAGTGAGCTGGATGCTGAAACTGTGAAGAGCATTCTGGCT
GAATACAAGATTCATAATGCCGATGTGACTCTACGTAGTGATGCTACAGCTGATGACCTCATTGATGTGG
TGGAAGGAAACAGAGTTTATATCCCCTGTATCTATGTGTTAAATAAGATTGACCAAATCTCCATTGAGGA
ATTGGATATCATCTATAAGGTGCCTCACTGTGTACCCATCTCTGCCCATCACCGCTGGAATTTTGATGAC
CTATTGGAAAAGATCTGGGACTATCTGAAACTAGTGAGAATTTACACCAAACCCAAAGGCCAGTTACCAG
ATTACACATCCCCAGTGGTGCTTCCTTACTCCAGGACCACAGTGGAGGATTTCTGCATGAAGATTCACAA
AAATCTTATCAAAGAATTTAAATATGCTCTGGTCTGGGGTCTCTCTGTGAAACACAATCCTCAGAAAGTG
GGTAAAGACCATACGTTGGAGGATGAGGATGTCATTCAAATTGTGAAGAAGTGA

Translation (367 aa):
MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVAKTGDARIGFV
GFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKGRGRQVIAVAR
TCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKKDKGGINLTATCPQSELDAETVKSILA
EYKIHNADVTLRSDATADDLIDVVEGNRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDD
LLEKIWDYLKLVRIYTKPKGQLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKV
GKDHTLEDEDVIQIVKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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