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Report for CCDS13854.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13854.1 Public Homo sapiens 22 RASL10A 24 110 108 CCDS HistoryNCBI Gene:10633Re-query CCDS DB by CCDS ID:13854.1Re-query CCDS DB by GeneID:10633See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13854.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216101.7 ENSP00000216101.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216101.7Link to Ensembl Protein Viewer:ENSP00000216101.6Re-query CCDS DB by Nucleotide ID:ENST00000216101Re-query CCDS DB by Protein ID:ENSP00000216101
Original member Current member NCBI NM_006477.5 NP_006468.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006477.5Link to Protein Sequence:NP_006468.1Re-query CCDS DB by Nucleotide ID:NM_006477Re-query CCDS DB by Protein ID:NP_006468Link to BLAST:NP_006468.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006468.1 203 Q92737-1 203 100% 0 0

Chromosomal Locations for CCDS 13854.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 29313301 29313568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29313863 29313987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29315028 29315246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (612 nt):
ATGGGGGGTAGCCTGCGGGTGGCCGTTCTAGGCGCCCCGGGCGTGGGCAAGACGGCCATCATCCGCCAGT
TCCTGTTCGGTGACTACCCCGAGCGCCACCGGCCCACGGACGGGCCGCGCCTCTACCGACCCGCGGTGCT
GCTCGACGGCGCCGTCTACGACTTGAGCATCCGCGACGGCGACGTCGCTGGCCCCGGCTCGAGCCCCGGG
GGTCCGGAGGAGTGGCCAGACGCTAAGGACTGGAGCTTGCAGGACACGGACGCCTTCGTGCTCGTCTACG
ACATCTGCAGCCCGGACAGTTTCGACTACGTGAAGGCCCTGCGGCAGCGCATCGCGGAGACCAGGCCGGC
GGGCGCGCCCGAAGCGCCCATCCTCGTGGTAGGCAACAAGCGGGACAGGCAGCGGCTGCGCTTCGGACCG
CGGCGCGCGCTGGCCGCCCTAGTGCGCAGGGGCTGGCGCTGCGGCTACCTCGAGTGCTCCGCCAAGTACA
ACTGGCACGTGCTGCGTCTCTTCCGCGAGCTGCTGCGCTGCGCTCTGGTGCGCGCGCGCCCTGCACACCC
GGCCCTGCGCCTGCAGGGGGCGCTGCATCCCGCGCGCTGCAGCCTCATGTGA

Translation (203 aa):
MGGSLRVAVLGAPGVGKTAIIRQFLFGDYPERHRPTDGPRLYRPAVLLDGAVYDLSIRDGDVAGPGSSPG
GPEEWPDAKDWSLQDTDAFVLVYDICSPDSFDYVKALRQRIAETRPAGAPEAPILVVGNKRDRQRLRFGP
RRALAALVRRGWRCGYLECSAKYNWHVLRLFRELLRCALVRARPAHPALRLQGALHPARCSLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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