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Report for CCDS13840.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13840.1 Public Homo sapiens 22 CRYBB1 24 110 108 CCDS HistoryNCBI Gene:1414Re-query CCDS DB by CCDS ID:13840.1Re-query CCDS DB by GeneID:1414See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13840.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000647684.1 ENSP00000497249.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000647684.1Link to Ensembl Protein Viewer:ENSP00000497249.1Re-query CCDS DB by Nucleotide ID:ENST00000647684Re-query CCDS DB by Protein ID:ENSP00000497249
Original member Current member NCBI NM_001887.4 NP_001878.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001887.4Link to Protein Sequence:NP_001878.1Re-query CCDS DB by Nucleotide ID:NM_001887Re-query CCDS DB by Protein ID:NP_001878Link to BLAST:NP_001878.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001878.1 252 P53674 252 100% 0 0

Chromosomal Locations for CCDS 13840.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 26599490 26599673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26601879 26602021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26607889 26608021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26612072 26612190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26616140 26616319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGTCTCAGGCTGCAAAGGCCTCGGCCTCGGCCACAGTGGCGGTGAACCCAGGGCCTGACACCAAGGGGA
AGGGGGCCCCACCTGCAGGAACATCCCCTAGTCCCGGCACTACCCTGGCCCCAACAACCGTGCCTATTAC
CAGCGCCAAGGCGGCGGAACTGCCTCCTGGGAACTACAGGCTGGTGGTCTTCGAACTGGAAAACTTCCAG
GGCCGTCGAGCAGAATTCTCGGGGGAGTGCTCAAATCTGGCAGACCGTGGCTTCGACCGTGTGCGCAGCA
TCATTGTCTCCGCGGGACCCTGGGTCGCCTTTGAGCAGTCCAACTTCCGCGGGGAGATGTTCATCCTGGA
GAAGGGCGAGTACCCTCGCTGGAACACATGGTCGAGCAGCTACCGCAGTGATCGGCTCATGTCCTTCCGG
CCCATCAAAATGGATGCCCAGGAGCACAAAATCTCCCTGTTTGAAGGGGCCAACTTCAAGGGCAACACCA
TAGAGATCCAGGGGGACGACGCACCCAGTCTCTGGGTCTACGGCTTCAGTGACCGCGTGGGCAGCGTGAA
GGTCTCCAGTGGAACATGGGTTGGCTATCAGTATCCTGGCTACCGCGGGTACCAGTACCTCCTAGAGCCT
GGTGACTTCCGGCACTGGAATGAGTGGGGAGCCTTCCAGCCACAGATGCAGTCCCTGCGTCGCCTGCGTG
ACAAGCAGTGGCACCTCGAGGGGTCCTTCCCTGTCCTGGCCACAGAGCCCCCCAAGTGA

Translation (252 aa):
MSQAAKASASATVAVNPGPDTKGKGAPPAGTSPSPGTTLAPTTVPITSAKAAELPPGNYRLVVFELENFQ
GRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKGEYPRWNTWSSSYRSDRLMSFR
PIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGFSDRVGSVKVSSGTWVGYQYPGYRGYQYLLEP
GDFRHWNEWGAFQPQMQSLRRLRDKQWHLEGSFPVLATEPPK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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