NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS13755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13755.1 Public Homo sapiens 22 TSSK2 24 110 108 CCDS HistoryNCBI Gene:23617Re-query CCDS DB by CCDS ID:13755.1Re-query CCDS DB by GeneID:23617See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13755.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399635.4 ENSP00000382544.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399635.4Link to Ensembl Protein Viewer:ENSP00000382544.2Re-query CCDS DB by Nucleotide ID:ENST00000399635Re-query CCDS DB by Protein ID:ENSP00000382544
Original member Current member NCBI NM_053006.5 NP_443732.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_053006.5Link to Protein Sequence:NP_443732.3Re-query CCDS DB by Nucleotide ID:NM_053006Re-query CCDS DB by Protein ID:NP_443732Link to BLAST:NP_443732.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443732.3 358 Q96PF2 358 100% 0 0

Chromosomal Locations for CCDS 13755.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 19131400 19132476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGGACGATGCCACAGTCCTAAGGAAGAAGGGTTACATCGTAGGCATCAATCTTGGCAAGGGTTCCTACG
CAAAAGTCAAATCTGCCTACTCTGAGCGCCTCAAGTTCAATGTGGCTGTCAAGATCATCGACCGCAAGAA
AACACCTACTGACTTTGTGGAGAGATTCCTTCCTCGGGAGATGGACATCCTGGCAACTGTCAACCACGGC
TCCATCATCAAGACTTACGAGATCTTTGAGACCTCTGACGGACGGATCTACATCATCATGGAGCTTGGCG
TCCAGGGCGACCTCCTCGAGTTCATCAAGTGCCAGGGAGCCCTGCATGAGGACGTGGCACGCAAGATGTT
CCGACAGCTCTCCTCCGCCGTCAAGTACTGCCACGACCTGGACATCGTCCACCGGGACCTCAAGTGCGAG
AACCTTCTCCTCGACAAGGACTTCAACATCAAGCTGTCTGACTTTGGCTTCTCCAAGCGCTGCCTGCGGG
ACAGCAATGGGCGCATCATCCTCAGCAAGACCTTCTGCGGGTCGGCAGCATATGCAGCCCCCGAGGTGCT
GCAGAGCATCCCCTACCAGCCCAAGGTGTATGACATCTGGAGCCTGGGCGTGATCCTGTACATCATGGTC
TGCGGCTCCATGCCCTATGACGACTCCGACATCAGGAAGATGCTGCGTATCCAGAAGGAGCACCGTGTGG
ACTTCCCGCGCTCCAAGAACCTGACCTGCGAGTGCAAGGACCTCATCTACCGCATGCTGCAGCCCGACGT
CAGCCAGCGGCTCCACATCGATGAGATCCTCAGCCACTCGTGGCTGCAGCCCCCCAAGCCCAAAGCCACG
TCTTCTGCCTCCTTCAAGAGGGAGGGGGAGGGCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGACAG
GCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCC
CGAGAACGAGAACAGGATGGAGGACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATCACATCTCCGGA
GCTGAGGTGGGGAAAGCAAGCACCTAG

Translation (358 aa):
MDDATVLRKKGYIVGINLGKGSYAKVKSAYSERLKFNVAVKIIDRKKTPTDFVERFLPREMDILATVNHG
SIIKTYEIFETSDGRIYIIMELGVQGDLLEFIKCQGALHEDVARKMFRQLSSAVKYCHDLDIVHRDLKCE
NLLLDKDFNIKLSDFGFSKRCLRDSNGRIILSKTFCGSAAYAAPEVLQSIPYQPKVYDIWSLGVILYIMV
CGSMPYDDSDIRKMLRIQKEHRVDFPRSKNLTCECKDLIYRMLQPDVSQRLHIDEILSHSWLQPPKPKAT
SSASFKREGEGKYRAECKLDTKTGLRPDHRPDHKLGAKTQHRLLVVPENENRMEDRLAETSRAKDHHISG
AEVGKAST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH