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Report for CCDS13715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13715.1 Public Homo sapiens 21 PTTG1IP 24 110 108 CCDS HistoryNCBI Gene:754Re-query CCDS DB by CCDS ID:13715.1Re-query CCDS DB by GeneID:754See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330938.8 ENSP00000328325.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330938.8Link to Ensembl Protein Viewer:ENSP00000328325.3Re-query CCDS DB by Nucleotide ID:ENST00000330938Re-query CCDS DB by Protein ID:ENSP00000328325
Original member Current member NCBI NM_004339.4 NP_004330.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004339.4Link to Protein Sequence:NP_004330.1Re-query CCDS DB by Nucleotide ID:NM_004339Re-query CCDS DB by Protein ID:NP_004330Link to BLAST:NP_004330.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004330.1 180 P53801 180 100% 0 0

Chromosomal Locations for CCDS 13715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44851581 44851627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44855210 44855256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44856193 44856364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44861163 44861271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44865395 44865447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44873502 44873616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGGCGCCCGGAGTGGCCCGCGGGCCGACGCCGTACTGGAGGTTGCGCCTCGGTGGCGCCGCGCTGCTCC
TGCTGCTCATCCCGGTGGCCGCCGCGCAGGAGCCTCCCGGAGCTGCTTGTTCTCAGAACACAAACAAAAC
CTGTGAAGAGTGCCTGAAGAACGTCTCCTGTCTTTGGTGCAACACTAACAAGGCTTGTCTGGACTACCCA
GTTACAAGCGTCTTGCCACCGGCTTCCCTTTGTAAATTGAGCTCTGCACGCTGGGGAGTTTGTTGGGTGA
ACTTTGAGGCGCTGATCATCACCATGTCGGTAGTCGGGGGAACCCTCCTCCTGGGCATTGCCATCTGCTG
CTGCTGCTGCTGCAGGAGGAAGAGGAGCCGGAAGCCGGACAGGAGTGAGGAGAAGGCCATGCGTGAGCGG
GAGGAGAGGCGGATACGGCAGGAGGAACGGAGAGCAGAGATGAAGACAAGACATGATGAAATCAGAAAAA
AATATGGCCTGTTTAAAGAAGAAAACCCGTATGCTAGATTTGAAAACAACTAA

Translation (180 aa):
MAPGVARGPTPYWRLRLGGAALLLLLIPVAAAQEPPGAACSQNTNKTCEECLKNVSCLWCNTNKACLDYP
VTSVLPPASLCKLSSARWGVCWVNFEALIITMSVVGGTLLLGIAICCCCCCRRKRSRKPDRSEEKAMRER
EERRIRQEERRAEMKTRHDEIRKKYGLFKEENPYARFENN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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