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Report for CCDS13673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13673.1 Public Homo sapiens 21 MX1 24 110 108 CCDS HistoryNCBI Gene:4599Re-query CCDS DB by CCDS ID:13673.1Re-query CCDS DB by GeneID:4599See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13673.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398598.8 ENSP00000381599.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398598.8Link to Ensembl Protein Viewer:ENSP00000381599.3Re-query CCDS DB by Nucleotide ID:ENST00000398598Re-query CCDS DB by Protein ID:ENSP00000381599
Original member Current member EBI ENST00000398600.6 ENSP00000381601.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398600.6Link to Ensembl Protein Viewer:ENSP00000381601.2Re-query CCDS DB by Nucleotide ID:ENST00000398600Re-query CCDS DB by Protein ID:ENSP00000381601
Original member Current member EBI ENST00000419044.6 ENSP00000392151.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419044.6Link to Ensembl Protein Viewer:ENSP00000392151.2Re-query CCDS DB by Nucleotide ID:ENST00000419044Re-query CCDS DB by Protein ID:ENSP00000392151
Original member Current member EBI ENST00000417963.6 ENSP00000402215.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417963.6Link to Ensembl Protein Viewer:ENSP00000402215.2Re-query CCDS DB by Nucleotide ID:ENST00000417963Re-query CCDS DB by Protein ID:ENSP00000402215
Original member Current member EBI ENST00000413778.6 ENSP00000408498.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000413778.6Link to Ensembl Protein Viewer:ENSP00000408498.2Re-query CCDS DB by Nucleotide ID:ENST00000413778Re-query CCDS DB by Protein ID:ENSP00000408498
Original member Current member EBI ENST00000455164.6 ENSP00000410523.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455164.6Link to Ensembl Protein Viewer:ENSP00000410523.2Re-query CCDS DB by Nucleotide ID:ENST00000455164Re-query CCDS DB by Protein ID:ENSP00000410523
Original member Current member EBI ENST00000680536.1 ENSP00000505029.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680536.1Link to Ensembl Protein Viewer:ENSP00000505029.1Re-query CCDS DB by Nucleotide ID:ENST00000680536Re-query CCDS DB by Protein ID:ENSP00000505029
Original member Current member EBI ENST00000679543.1 ENSP00000505047.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679543.1Link to Ensembl Protein Viewer:ENSP00000505047.1Re-query CCDS DB by Nucleotide ID:ENST00000679543Re-query CCDS DB by Protein ID:ENSP00000505047
Original member Current member EBI ENST00000681849.1 ENSP00000505051.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681849.1Link to Ensembl Protein Viewer:ENSP00000505051.1Re-query CCDS DB by Nucleotide ID:ENST00000681849Re-query CCDS DB by Protein ID:ENSP00000505051
Original member Current member EBI ENST00000679911.1 ENSP00000505189.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679911.1Link to Ensembl Protein Viewer:ENSP00000505189.1Re-query CCDS DB by Nucleotide ID:ENST00000679911Re-query CCDS DB by Protein ID:ENSP00000505189
Original member Current member EBI ENST00000681896.1 ENSP00000505457.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681896.1Link to Ensembl Protein Viewer:ENSP00000505457.1Re-query CCDS DB by Nucleotide ID:ENST00000681896Re-query CCDS DB by Protein ID:ENSP00000505457
Original member Current member EBI ENST00000681607.1 ENSP00000505489.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681607.1Link to Ensembl Protein Viewer:ENSP00000505489.1Re-query CCDS DB by Nucleotide ID:ENST00000681607Re-query CCDS DB by Protein ID:ENSP00000505489
Original member Current member EBI ENST00000679445.1 ENSP00000505630.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679445.1Link to Ensembl Protein Viewer:ENSP00000505630.1Re-query CCDS DB by Nucleotide ID:ENST00000679445Re-query CCDS DB by Protein ID:ENSP00000505630
Original member Current member EBI ENST00000681191.1 ENSP00000505657.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681191.1Link to Ensembl Protein Viewer:ENSP00000505657.1Re-query CCDS DB by Nucleotide ID:ENST00000681191Re-query CCDS DB by Protein ID:ENSP00000505657
Original member Current member EBI ENST00000681857.1 ENSP00000505669.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681857.1Link to Ensembl Protein Viewer:ENSP00000505669.1Re-query CCDS DB by Nucleotide ID:ENST00000681857Re-query CCDS DB by Protein ID:ENSP00000505669
Original member Current member EBI ENST00000680364.1 ENSP00000505781.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680364.1Link to Ensembl Protein Viewer:ENSP00000505781.1Re-query CCDS DB by Nucleotide ID:ENST00000680364Re-query CCDS DB by Protein ID:ENSP00000505781
Original member Current member EBI ENST00000679464.1 ENSP00000505874.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679464.1Link to Ensembl Protein Viewer:ENSP00000505874.1Re-query CCDS DB by Nucleotide ID:ENST00000679464Re-query CCDS DB by Protein ID:ENSP00000505874
Original member Current member EBI ENST00000680629.1 ENSP00000506047.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680629.1Link to Ensembl Protein Viewer:ENSP00000506047.1Re-query CCDS DB by Nucleotide ID:ENST00000680629Re-query CCDS DB by Protein ID:ENSP00000506047
Original member Current member EBI ENST00000681415.1 ENSP00000506062.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681415.1Link to Ensembl Protein Viewer:ENSP00000506062.1Re-query CCDS DB by Nucleotide ID:ENST00000681415Re-query CCDS DB by Protein ID:ENSP00000506062
Original member Current member EBI ENST00000680347.1 ENSP00000506183.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680347.1Link to Ensembl Protein Viewer:ENSP00000506183.1Re-query CCDS DB by Nucleotide ID:ENST00000680347Re-query CCDS DB by Protein ID:ENSP00000506183
Original member Current member EBI ENST00000680760.1 ENSP00000506199.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680760.1Link to Ensembl Protein Viewer:ENSP00000506199.1Re-query CCDS DB by Nucleotide ID:ENST00000680760Re-query CCDS DB by Protein ID:ENSP00000506199
Original member Current member EBI ENST00000681039.1 ENSP00000506220.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681039.1Link to Ensembl Protein Viewer:ENSP00000506220.1Re-query CCDS DB by Nucleotide ID:ENST00000681039Re-query CCDS DB by Protein ID:ENSP00000506220
Original member Current member EBI ENST00000680176.1 ENSP00000506270.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680176.1Link to Ensembl Protein Viewer:ENSP00000506270.1Re-query CCDS DB by Nucleotide ID:ENST00000680176Re-query CCDS DB by Protein ID:ENSP00000506270
Original member Current member EBI ENST00000681266.1 ENSP00000506348.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681266.1Link to Ensembl Protein Viewer:ENSP00000506348.1Re-query CCDS DB by Nucleotide ID:ENST00000681266Re-query CCDS DB by Protein ID:ENSP00000506348
Original member Current member EBI ENST00000679705.1 ENSP00000506372.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679705.1Link to Ensembl Protein Viewer:ENSP00000506372.1Re-query CCDS DB by Nucleotide ID:ENST00000679705Re-query CCDS DB by Protein ID:ENSP00000506372
Original member Current member EBI ENST00000680182.1 ENSP00000506395.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680182.1Link to Ensembl Protein Viewer:ENSP00000506395.1Re-query CCDS DB by Nucleotide ID:ENST00000680182Re-query CCDS DB by Protein ID:ENSP00000506395
Original member Current member EBI ENST00000679626.1 ENSP00000506481.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679626.1Link to Ensembl Protein Viewer:ENSP00000506481.1Re-query CCDS DB by Nucleotide ID:ENST00000679626Re-query CCDS DB by Protein ID:ENSP00000506481
Original member Current member EBI ENST00000680776.1 ENSP00000506512.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680776.1Link to Ensembl Protein Viewer:ENSP00000506512.1Re-query CCDS DB by Nucleotide ID:ENST00000680776Re-query CCDS DB by Protein ID:ENSP00000506512
Original member Current member EBI ENST00000681867.1 ENSP00000506690.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681867.1Link to Ensembl Protein Viewer:ENSP00000506690.1Re-query CCDS DB by Nucleotide ID:ENST00000681867Re-query CCDS DB by Protein ID:ENSP00000506690
Original member Current member EBI ENST00000681671.1 ENSP00000506712.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681671.1Link to Ensembl Protein Viewer:ENSP00000506712.1Re-query CCDS DB by Nucleotide ID:ENST00000681671Re-query CCDS DB by Protein ID:ENSP00000506712
Original member Current member NCBI NM_001144925.2 NP_001138397.1 Accepted alive Link to Nucleotide Sequence:NM_001144925.2Link to Protein Sequence:NP_001138397.1Re-query CCDS DB by Nucleotide ID:NM_001144925Re-query CCDS DB by Protein ID:NP_001138397Link to BLAST:NP_001138397.1
Original member Current member NCBI NM_001178046.3 NP_001171517.1 Accepted alive Link to Nucleotide Sequence:NM_001178046.3Link to Protein Sequence:NP_001171517.1Re-query CCDS DB by Nucleotide ID:NM_001178046Re-query CCDS DB by Protein ID:NP_001171517Link to BLAST:NP_001171517.1
Original member Current member NCBI NM_002462.5 NP_002453.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002462.5Link to Protein Sequence:NP_002453.2Re-query CCDS DB by Nucleotide ID:NM_002462Re-query CCDS DB by Protein ID:NP_002453Link to BLAST:NP_002453.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138397.1 662 P20591-1 662 100% 0 0
NP_001171517.1 662 P20591-1 662 100% 0 0
NP_002453.2 662 P20591-1 662 100% 0 0

Chromosomal Locations for CCDS 13673.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 41432071 41432175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41435837 41436029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41437015 41437152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41439694 41439848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41440887 41441025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41441716 41441914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41443788 41443866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41445448 41445570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41446000 41446141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41449137 41449295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41451167 41451243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41452621 41452869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 41458528 41458758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1989 nt):
ATGGTTGTTTCCGAAGTGGACATCGCAAAAGCTGATCCAGCTGCTGCATCCCACCCTCTATTACTGAATG
GAGATGCTACTGTGGCCCAGAAAAATCCAGGCTCGGTGGCTGAGAACAACCTGTGCAGCCAGTATGAGGA
GAAGGTGCGCCCCTGCATCGACCTCATTGACTCCCTGCGGGCTCTAGGTGTGGAGCAGGACCTGGCCCTG
CCAGCCATCGCCGTCATCGGGGACCAGAGCTCGGGCAAGAGCTCCGTGTTGGAGGCACTGTCAGGAGTTG
CCCTTCCCAGAGGCAGCGGGATCGTGACCAGATGCCCGCTGGTGCTGAAACTGAAGAAACTTGTGAACGA
AGATAAGTGGAGAGGCAAGGTCAGTTACCAGGACTACGAGATTGAGATTTCGGATGCTTCAGAGGTAGAA
AAGGAAATTAATAAAGCCCAGAATGCCATCGCCGGGGAAGGAATGGGAATCAGTCATGAGCTAATCACCC
TGGAGATCAGCTCCCGAGATGTCCCGGATCTGACTCTAATAGACCTTCCTGGCATAACCAGAGTGGCTGT
GGGCAATCAGCCTGCTGACATTGGGTATAAGATCAAGACACTCATCAAGAAGTACATCCAGAGGCAGGAG
ACAATCAGCCTGGTGGTGGTCCCCAGTAATGTGGACATCGCCACCACAGAGGCTCTCAGCATGGCCCAGG
AGGTGGACCCCGAGGGAGACAGGACCATCGGAATCTTGACGAAGCCTGATCTGGTGGACAAAGGAACTGA
AGACAAGGTTGTGGACGTGGTGCGGAACCTCGTGTTCCACCTGAAGAAGGGTTACATGATTGTCAAGTGC
CGGGGCCAGCAGGAGATCCAGGACCAGCTGAGCCTGTCCGAAGCCCTGCAGAGAGAGAAGATCTTCTTTG
AGAACCACCCATATTTCAGGGATCTGCTGGAGGAAGGAAAGGCCACGGTTCCCTGCCTGGCAGAAAAACT
TACCAGCGAGCTCATCACACATATCTGTAAATCTCTGCCCCTGTTAGAAAATCAAATCAAGGAGACTCAC
CAGAGAATAACAGAGGAGCTACAAAAGTATGGTGTCGACATACCGGAAGACGAAAATGAAAAAATGTTCT
TCCTGATAGATAAAGTTAATGCCTTTAATCAGGACATCACTGCTCTCATGCAAGGAGAGGAAACTGTAGG
GGAGGAAGACATTCGGCTGTTTACCAGACTCCGACACGAGTTCCACAAATGGAGTACAATAATTGAAAAC
AATTTTCAAGAAGGCCATAAAATTTTGAGTAGAAAAATCCAGAAATTTGAAAATCAGTATCGTGGTAGAG
AGCTGCCAGGCTTTGTGAATTACAGGACATTTGAGACAATCGTGAAACAGCAAATCAAGGCACTGGAAGA
GCCGGCTGTGGATATGCTACACACCGTGACGGATATGGTCCGGCTTGCTTTCACAGATGTTTCGATAAAA
AATTTTGAAGAGTTTTTTAACCTCCACAGAACCGCCAAGTCCAAAATTGAAGACATTAGAGCAGAACAAG
AGAGAGAAGGTGAGAAGCTGATCCGCCTCCACTTCCAGATGGAACAGATTGTCTACTGCCAGGACCAGGT
ATACAGGGGTGCATTGCAGAAGGTCAGAGAGAAGGAGCTGGAAGAAGAAAAGAAGAAGAAATCCTGGGAT
TTTGGGGCTTTCCAGTCCAGCTCGGCAACAGACTCTTCCATGGAGGAGATCTTTCAGCACCTGATGGCCT
ATCACCAGGAGGCCAGCAAGCGCATCTCCAGCCACATCCCTTTGATCATCCAGTTCTTCATGCTCCAGAC
GTACGGCCAGCAGCTTCAGAAGGCCATGCTGCAGCTCCTGCAGGACAAGGACACCTACAGCTGGCTCCTG
AAGGAGCGGAGCGACACCAGCGACAAGCGGAAGTTCCTGAAGGAGCGGCTTGCACGGCTGACGCAGGCTC
GGCGCCGGCTTGCCCAGTTCCCCGGTTAA

Translation (662 aa):
MVVSEVDIAKADPAAASHPLLLNGDATVAQKNPGSVAENNLCSQYEEKVRPCIDLIDSLRALGVEQDLAL
PAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDYEIEISDASEVE
KEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQE
TISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKC
RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIKETH
QRITEELQKYGVDIPEDENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIEN
NFQEGHKILSRKIQKFENQYRGRELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVSIK
NFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYCQDQVYRGALQKVREKELEEEKKKKSWD
FGAFQSSSATDSSMEEIFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQDKDTYSWLL
KERSDTSDKRKFLKERLARLTQARRRLAQFPG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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