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Report for CCDS1364.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1364.1 Public Homo sapiens 1 NIBAN1 24 110 108 CCDS HistoryNCBI Gene:116496Re-query CCDS DB by CCDS ID:1364.1Re-query CCDS DB by GeneID:116496See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1364.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367511.4 ENSP00000356481.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367511.4Link to Ensembl Protein Viewer:ENSP00000356481.3Re-query CCDS DB by Nucleotide ID:ENST00000367511Re-query CCDS DB by Protein ID:ENSP00000356481
Original member Current member NCBI NM_052966.4 NP_443198.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052966.4Link to Protein Sequence:NP_443198.1Re-query CCDS DB by Nucleotide ID:NM_052966Re-query CCDS DB by Protein ID:NP_443198Link to BLAST:NP_443198.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443198.1 928 Q9BZQ8 928 100% 0 0

Chromosomal Locations for CCDS 1364.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 184794977 184796097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184798079 184798190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184803585 184803692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184805946 184806056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184808074 184808235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184818638 184818825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184823167 184823329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184823638 184823742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184831847 184831962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184884633 184884800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184890108 184890222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184894075 184894206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184899179 184899309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184974302 184974356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2787 nt):
ATGGGCGGCTCAGCCTCCAGCCAGCTGGACGAGGGCAAGTGCGCTTACATCCGAGGGAAAACTGAGGCTG
CCATCAAAAACTTCAGTCCCTACTACAGTCGTCAGTACTCTGTGGCTTTCTGCAATCACGTGCGCACTGA
AGTAGAACAGCAAAGAGATTTAACGTCACAGTTTTTGAAGACCAAGCCACCATTGGCGCCTGGAACTATT
TTGTATGAAGCAGAGCTATCACAATTTTCTGAAGACATAAAGAAGTGGAAGGAGAGATACGTTGTAGTTA
AAAATGATTATGCTGTGGAGAGCTATGAGAATAAAGAGGCCTATCAGAGAGGAGCTGCTCCTAAATGTCG
AATTCTTCCAGCCGGTGGCAAGGTGTTAACCTCAGAAGATGAATATAATCTGTTGTCTGACAGGCATTTC
CCAGACCCTCTTGCCTCCAGTGAGAAGGAGAACACTCAGCCCTTTGTGGTCCTGCCCAAGGAATTCCCAG
TGTACCTGTGGCAGCCCTTCTTCAGACACGGCTACTTCTGCTTCCACGAGGCTGCTGACCAGAAGAGGTT
TAGTGCCCTCCTGAGTGACTGCGTCAGGCATCTCAATCATGATTACATGAAGCAGATGACATTTGAAGCC
CAAGCCTTTTTAGAAGCTGTGCAATTCTTCCGACAGGAGAAGGGTCACTATGGTTCCTGGGAAATGATCA
CTGGGGATGAAATCCAGATCCTGAGTAACCTGGTGATGGAGGAGCTCCTGCCCACTCTTCAGACAGACCT
GCTGCCTAAGATGAAGGGGAAGAAGAATGACAGAAAGAGGACGTGGCTTGGTCTCCTCGAGGAGGCCTAC
ACCCTGGTTCAGCATCAAGTTTCAGAAGGATTAAGTGCCTTGAAGGAGGAATGCAGAGCTCTGACAAAGG
GCCTGGAAGGAACGATCCGTTCTGACATGGATCAGATTGTGAACTCAAAGAACTATTTAATTGGAAAGAT
CAAAGCGATGGTGGCCCAGCCGGCGGAGAAAAGCTGCTTGGAGAGTGTGCAGCCATTCCTGGCATCCATC
CTGGAGGAGCTCATGGGACCAGTGAGCTCGGGATTCAGTGAAGTACGTGTACTCTTTGAGAAAGAGGTGA
ATGAAGTCAGCCAGAACTTCCAGACCACCAAAGACAGTGTCCAGCTAAAGGAGCATCTAGACCGGCTTAT
GAATCTTCCGCTGCATTCCGTGAAGATGGAACCTTGTTATACTAAAGTCAACCTGCTTCACGAGCGCCTG
CAGGATCTCAAGAGCCGCTTCAGATTCCCCCACATTGATCTGGTGGTTCAGAGGACACAGAACTACATGC
AGGAGCTAATGGAGAATGCAGTGTTCACTTTTGAGCAGTTGCTTTCCCCACATCTCCAAGGAGAGGCCTC
CAAAACTGCAGTTGCCATTGAGAAGGTTAAACTCCGAGTCTTAAAGCAATATGATTATGACAGCAGCACC
ATCCGAAAGAAGATATTTCAAGAGGCACTAGTTCAAATCACACTTCCCACTGTGCAGAAGGCACTGGCGT
CCACATGCAAACCAGAGCTTCAGAAATACGAGCAGTTCATCTTTGCAGATCATACCAATATGATTCACGT
TGAAAATGTCTATGAGGAGATTTTACATCAGATCCTGCTTGATGAAACTCTGAAAGTGATAAAGGAAGCT
GCTATCTTGAAGAAACACAACTTATTTGAAGATAACATGGCCTTGCCCAGTGAAAGTGTGTCCAGCTTAA
CAGATCTAAAGCCCCCCACAGGGTCAAACCAGGCCAGCCCTGCCAGGAGAGCTTCTGCCATTCTGCCAGG
AGTTCTGGGTAGTGAGACCCTCAGTAACGAAGTATTCCAGGAGTCAGAGGAAGAGAAGCAGCCTGAGGTC
CCTAGCTCGTTGGCCAAAGGAGAAAGCCTTTCTCTCCCTGGGCCAAGCCCACCCCCAGATGGGACTGAGC
AGGTGATTATTTCAAGAGTGGATGACCCCGTGGTGAATCCTGTGGCAACAGAGGACACAGCAGGACTCCC
GGGCACATGCTCATCAGAGCTGGAGTTTGGAGGGACCCTTGAGGATGAAGAACCCGCCCAGGAAGAGCCA
GAACCCATCACTGCCTCGGGTTCTTTGAAGGCGCTCAGAAAGTTGCTGACAGCGTCCGTGGAAGTACCAG
TGGACTCTGCTCCAGTGATGGAAGAAGATACGAATGGGGAGAGCCACGTTCCCCAAGAAAATGAAGAAGA
AGAGGAAAAAGAGCCCAGTCAGGCAGCTGCCATCCACCCCGACAACTGTGAAGAAAGTGAAGTCAGCGAG
AGGGAGGCCCAACCTCCCTGTCCCGAGGCCCATGGGGAGGAGTTGGGGGGATTTCCAGAGGTAGGCAGCC
CAGCCTCTCCGCCAGCCAGTGGAGGGCTCACCGAGGAGCCCCTGGGGCCCATGGAGGGGGAGCTCCCAGG
AGAGGCCTGCACACTCACTGCCCATGAAGGAAGAGGGGGCAAGTGTACCGAGGAAGGGGATGCCTCACAG
CAAGAGGGCTGCACCTTAGGTTCTGACCCCATCTGCCTCAGTGAGAGCCAGGTTTCTGAGGAACAAGAAG
AGATGGGAGGGCAAAGCAGCGCGGCCCAGGCCACGGCCAGTGTGAATGCAGAGGAGATCAAGGTAGCCCG
TATTCATGAGTGTCAGTGGGTGGTGGAGGATGCTCCAAACCCGGATGTCCTGCTGTCACACAAAGATGAC
GTGAAGGAGGGAGAAGGTGGTCAGGAGAGTTTCCCAGAGCTGCCCTCAGAGGAGTGA

Translation (928 aa):
MGGSASSQLDEGKCAYIRGKTEAAIKNFSPYYSRQYSVAFCNHVRTEVEQQRDLTSQFLKTKPPLAPGTI
LYEAELSQFSEDIKKWKERYVVVKNDYAVESYENKEAYQRGAAPKCRILPAGGKVLTSEDEYNLLSDRHF
PDPLASSEKENTQPFVVLPKEFPVYLWQPFFRHGYFCFHEAADQKRFSALLSDCVRHLNHDYMKQMTFEA
QAFLEAVQFFRQEKGHYGSWEMITGDEIQILSNLVMEELLPTLQTDLLPKMKGKKNDRKRTWLGLLEEAY
TLVQHQVSEGLSALKEECRALTKGLEGTIRSDMDQIVNSKNYLIGKIKAMVAQPAEKSCLESVQPFLASI
LEELMGPVSSGFSEVRVLFEKEVNEVSQNFQTTKDSVQLKEHLDRLMNLPLHSVKMEPCYTKVNLLHERL
QDLKSRFRFPHIDLVVQRTQNYMQELMENAVFTFEQLLSPHLQGEASKTAVAIEKVKLRVLKQYDYDSST
IRKKIFQEALVQITLPTVQKALASTCKPELQKYEQFIFADHTNMIHVENVYEEILHQILLDETLKVIKEA
AILKKHNLFEDNMALPSESVSSLTDLKPPTGSNQASPARRASAILPGVLGSETLSNEVFQESEEEKQPEV
PSSLAKGESLSLPGPSPPPDGTEQVIISRVDDPVVNPVATEDTAGLPGTCSSELEFGGTLEDEEPAQEEP
EPITASGSLKALRKLLTASVEVPVDSAPVMEEDTNGESHVPQENEEEEEKEPSQAAAIHPDNCEESEVSE
REAQPPCPEAHGEELGGFPEVGSPASPPASGGLTEEPLGPMEGELPGEACTLTAHEGRGGKCTEEGDASQ
QEGCTLGSDPICLSESQVSEEQEEMGGQSSAAQATASVNAEEIKVARIHECQWVVEDAPNPDVLLSHKDD
VKEGEGGQESFPELPSEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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