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Report for CCDS13492.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13492.1 Public Homo sapiens 20 MTG2 24 110 108 CCDS HistoryNCBI Gene:26164Re-query CCDS DB by CCDS ID:13492.1Re-query CCDS DB by GeneID:26164See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13492.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370823.8 ENSP00000359859.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370823.8Link to Ensembl Protein Viewer:ENSP00000359859.3Re-query CCDS DB by Nucleotide ID:ENST00000370823Re-query CCDS DB by Protein ID:ENSP00000359859
Original member Current member NCBI NM_015666.4 NP_056481.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015666.4Link to Protein Sequence:NP_056481.1Re-query CCDS DB by Nucleotide ID:NM_015666Re-query CCDS DB by Protein ID:NP_056481Link to BLAST:NP_056481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056481.1 406 Q9H4K7-1 406 100% 0 0

Chromosomal Locations for CCDS 13492.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 62193421 62193624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62195802 62195949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62197852 62197967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62198634 62198852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62199119 62199257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62200683 62201077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGGCACCTGCAAGGTGTTTCTCAGCAAGATTGAGGACCGTGTTTCAGGGCGTGGGGCATTGGGCTTTGT
CCACATGGGCTGGCCTGAAGCCCAGCCGGCTACTGCCACAGCGGGCTTCTCCCAGGCTGCTCTCGGTCGG
CCGTGCGGACCTCGCCAAGCATCAGGAACTCCCGGGGAAGAAGCTGCTCTCTGAGAAAAAGCTGAAAAGG
TACTTTGTGGACTATCGGAGAGTGCTTGTCTGTGGAGGAAACGGAGGCGCTGGGGCAAGCTGCTTCCACA
GTGAGCCCCGCAAGGAGTTTGGAGGCCCTGATGGAGGGGACGGAGGCAACGGTGGACACGTCATTCTGAG
AGTTGACCAGCAAGTCAAGTCCCTGTCGTCGGTCCTGTCGCGGTACCAGGGTTTCAGTGGAGAAGATGGA
GGGAGTAAAAACTGCTTCGGGCGCAGTGGCGCCGTCCTCTACATCCGGGTCCCCGTGGGCACGCTGGTGA
AGGAGGGAGGCAGAGTTGTGGCCGACCTGTCTTGCGTGGGAGATGAGTACATTGCCGCGCTGGGCGGGGC
AGGAGGGAAAGGCAACCGCTTCTTCCTGGCCAACAACAACCGTGCCCCTGTGACCTGTACCCCTGGACAG
CCAGGACAGCAGCGAGTTCTCCACCTGGAGCTCAAGACGGTGGCCCACGCCGGAATGGTGGGATTCCCCA
ACGCCGGGAAGTCCTCACTGCTCCGGGCCATTTCAAACGCCAGACCCGCCGTGGCTTCCTACCCGTTCAC
CACCCTGAAGCCCCACGTCGGGATCGTCCACTACGAAGGCCACCTACAAATAGCAGTGGCCGACATCCCC
GGCATCATACGAGGCGCCCACCAGAACAGGGGTCTGGGGTCCGCCTTCCTCAGGCACATCGAGCGCTGCC
GCTTTCTCTTGTTCGTGGTGGATCTTTCTCAGCCTGAGCCGTGGACTCAAGTTGACGATTTAAAATATGA
ACTGGAGATGTATGAAAAGGGCCTGTCTGCGAGGCCCCACGCAATCGTCGCAAACAAGATTGACCTCCCT
GAAGCCCAAGCCAATCTGTCCCAGCTCCGGGATCACTTGGGACAGGAGGTCATCGTGCTGTCGGCGTTGA
CCGGCGAGAACCTGGAGCAGCTGCTGTTGCACCTGAAGGTGCTGTATGACGCCTACGCGGAGGCCGAGCT
GGGCCAGGGCCGCCAGCCGCTCAGGTGGTAG

Translation (406 aa):
MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKR
YFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDG
GSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQ
PGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIP
GIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLP
EAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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