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Report for CCDS13364.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13364.1 Public Homo sapiens 20 WFDC11 24 110 108 CCDS HistoryNCBI Gene:259239Re-query CCDS DB by CCDS ID:13364.1Re-query CCDS DB by GeneID:259239See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13364.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324384.4 ENSP00000318753.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324384.4Link to Ensembl Protein Viewer:ENSP00000318753.3Re-query CCDS DB by Nucleotide ID:ENST00000324384Re-query CCDS DB by Protein ID:ENSP00000318753
Original member Current member EBI ENST00000356562.6 ENSP00000348968.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356562.6Link to Ensembl Protein Viewer:ENSP00000348968.2Re-query CCDS DB by Nucleotide ID:ENST00000356562Re-query CCDS DB by Protein ID:ENSP00000348968
Original member Current member EBI ENST00000618797.4 ENSP00000479579.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618797.4Link to Ensembl Protein Viewer:ENSP00000479579.1Re-query CCDS DB by Nucleotide ID:ENST00000618797Re-query CCDS DB by Protein ID:ENSP00000479579
Original member Current member NCBI NM_147197.2 NP_671730.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_147197.2Link to Protein Sequence:NP_671730.1Re-query CCDS DB by Nucleotide ID:NM_147197Re-query CCDS DB by Protein ID:NP_671730Link to BLAST:NP_671730.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_671730.1 87 Q8NEX6 87 100% 0 0

Chromosomal Locations for CCDS 13364.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 45648719 45648739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45649257 45649399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45650501 45650600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGGTCAGCCTCATGAAGCTCTGGATACCCATGCTCATGACATTCTTCTGTACGGTGCTACTGTCTGTGC
TGGGAGAAATGAGGAAGAAAAGATATGACAGGAAGGAATTGTTACTTGAAGAATGCTGGGGAAAGCCAAA
TGTCAAAGAATGTACCAATAAGTGTTCTAAAGCCTTTAGATGTAAAGACAAAAATTACACATGCTGCTGG
ACCTATTGTGGAAACATCTGCTGGATAAACGTCGAAACCAGTGGAGATTACTAA

Translation (87 aa):
MVSLMKLWIPMLMTFFCTVLLSVLGEMRKKRYDRKELLLEECWGKPNVKECTNKCSKAFRCKDKNYTCCW
TYCGNICWINVETSGDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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