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Report for CCDS13154.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13154.1 Public Homo sapiens 20 CST11 24 110 108 CCDS HistoryNCBI Gene:140880Re-query CCDS DB by CCDS ID:13154.1Re-query CCDS DB by GeneID:140880See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13154.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377007.3 ENSP00000366206.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377007.3Link to Ensembl Protein Viewer:ENSP00000366206.3Re-query CCDS DB by Nucleotide ID:ENST00000377007Re-query CCDS DB by Protein ID:ENSP00000366206
Original member Current member NCBI NM_080830.3 NP_543020.2 Accepted alive Link to Nucleotide Sequence:NM_080830.3Link to Protein Sequence:NP_543020.2Re-query CCDS DB by Nucleotide ID:NM_080830Re-query CCDS DB by Protein ID:NP_543020Link to BLAST:NP_543020.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_543020.2 103 Q9H112-2 103 100% 0 0

Chromosomal Locations for CCDS 13154.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 23450506 23450589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 23452584 23452811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGATGGCTGAGCCCTGGCAGGCCCTACAGCTCCTGTTGGCCATTCTATTGACTCTGATGGCCCTCCCCT
ACCAAGCAAGGAAGAAAACCTTTCTAAGCGTCCATGAAGTGATGGCAGTAGAAAACTATGCGAAGGACAG
CTTGCAGTGGATCACCGACCAGTATAACAAGGAAAGTGATGACAAGTACCACTTCAGGATCTTCCGAGTC
CTTAAAGTCCAGAGGCAGCAAGTCAACTGCTTCTTCTCAGTGTTTGCTGTACCCTGGTTTGAACAGTACA
AAATTTTGAACAAAAGCTGCAGCAGTGACTAG

Translation (103 aa):
MMAEPWQALQLLLAILLTLMALPYQARKKTFLSVHEVMAVENYAKDSLQWITDQYNKESDDKYHFRIFRV
LKVQRQQVNCFFSVFAVPWFEQYKILNKSCSSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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