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Report for CCDS13143.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13143.1 Public Homo sapiens 20 INSM1 24 110 108 CCDS HistoryNCBI Gene:3642Re-query CCDS DB by CCDS ID:13143.1Re-query CCDS DB by GeneID:3642See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13143.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310227.3 ENSP00000312631.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310227.3Link to Ensembl Protein Viewer:ENSP00000312631.1Re-query CCDS DB by Nucleotide ID:ENST00000310227Re-query CCDS DB by Protein ID:ENSP00000312631
Original member Current member NCBI NM_002196.3 NP_002187.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002196.3Link to Protein Sequence:NP_002187.1Re-query CCDS DB by Nucleotide ID:NM_002196Re-query CCDS DB by Protein ID:NP_002187Link to BLAST:NP_002187.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002187.1 510 Q01101 510 100% 0 0

Chromosomal Locations for CCDS 13143.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 20368268 20369800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1533 nt):
ATGCCCCGCGGCTTCCTGGTGAAGCGCAGCAAGAAGTCCACGCCCGTTTCCTACCGGGTCCGCGGCGGCG
AGGACGGCGACCGCGCACTGCTGCTCTCGCCCAGCTGCGGGGGCGCCCGCGCCGAGCCCCCGGCGCCGAG
CCCGGTCCCCGGGCCGCTGCCGCCGCCGCCGCCCGCGGAGCGCGCCCATGCAGCGCTCGCCGCCGCGCTT
GCCTGCGCGCCTGGGCCGCAGCCACCCCCGCAGGGCCCGCGGGCCGCGCACTTCGGCAACCCCGAGGCTG
CGCACCCCGCGCCGCTCTACAGTCCCACGCGGCCCGTGAGCCGCGAGCACGAGAAGCACAAGTACTTCGA
ACGCAGCTTCAACCTGGGCTCGCCGGTCTCGGCCGAGTCCTTCCCCACGCCCGCCGCGCTGCTCGGAGGG
GGCGGCGGCGGCGGCGCGAGCGGAGCTGGCGGAGGCGGCACCTGCGGCGGCGACCCGCTGCTCTTCGCGC
CCGCCGAGCTCAAGATGGGCACGGCGTTCTCGGCTGGCGCCGAGGCGGCCCGCGGCCCGGGCCCCGGCCC
CCCACTGCCCCCTGCCGCCGCCCTGCGGCCCCCGGGAAAGCGGCCCCCGCCCCCTACCGCCGCGGAGCCG
CCCGCCAAGGCAGTCAAGGCCCCGGGCGCCAAGAAGCCCAAGGCCATCCGCAAGCTGCACTTCGAGGACG
AGGTGACCACGTCGCCCGTGCTGGGGCTCAAGATCAAGGAGGGCCCGGTGGAGGCGCCGCGGGGCCGCGC
GGGGGGCGCGGCGCGGCCGCTGGGCGAGTTCATCTGCCAGCTGTGCAAGGAGGAGTACGCCGACCCGTTC
GCGCTGGCGCAGCACAAATGCTCGCGCATCGTGCGTGTGGAGTACCGCTGTCCCGAGTGCGCCAAGGTCT
TCAGCTGCCCGGCCAACCTGGCCTCGCACCGCCGCTGGCACAAACCGCGGCCCGCGCCCGCCGCCGCCCG
CGCGCCGGAGCCAGAAGCAGCAGCCAGGGCTGAGGCGCGGGAGGCACCCGGCGGCGGCAGCGACCGGGAC
ACGCCGAGCCCCGGCGGCGTGTCCGAGTCGGGCTCCGAGGACGGGCTCTACGAGTGCCATCACTGCGCCA
AGAAGTTCCGCCGCCAGGCCTACCTACGCAAGCACCTGCTGGCGCACCACCAGGCGCTGCAGGCCAAGGG
CGCGCCGCTAGCGCCCCCGGCCGAGGACCTACTGGCCTTGTACCCCGGGCCCGACGAGAAGGCGCCCCAG
GAGGCGGCCGGCGACGGCGAGGGGGCCGGCGTGCTGGGCCTGAGTGCGTCCGCCGAGTGCCACCTGTGCC
CAGTGTGCGGAGAGTCGTTCGCCAGCAAGGGCGCTCAGGAGCGCCACCTGCGCCTGCTGCACGCCGCCCA
GGTGTTCCCCTGCAAGTACTGCCCGGCCACCTTCTACAGCTCGCCCGGCCTTACGCGGCACATCAACAAG
TGCCACCCATCCGAAAACAGACAGGTGATCCTCCTGCAGGTGCCCGTGCGCCCGGCCTGCTAG

Translation (510 aa):
MPRGFLVKRSKKSTPVSYRVRGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAERAHAALAAAL
ACAPGPQPPPQGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFNLGSPVSAESFPTPAALLGG
GGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAARGPGPGPPLPPAAALRPPGKRPPPPTAAEP
PAKAVKAPGAKKPKAIRKLHFEDEVTTSPVLGLKIKEGPVEAPRGRAGGAARPLGEFICQLCKEEYADPF
ALAQHKCSRIVRVEYRCPECAKVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAEAREAPGGGSDRD
TPSPGGVSESGSEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQ
EAAGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK
CHPSENRQVILLQVPVRPAC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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