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Report for CCDS13134.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13134.1 Public Homo sapiens 20 ZNF133 24 110 108 CCDS HistoryNCBI Gene:7692Re-query CCDS DB by CCDS ID:13134.1Re-query CCDS DB by GeneID:7692See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13134.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377671.7 ENSP00000366899.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377671.7Link to Ensembl Protein Viewer:ENSP00000366899.3Re-query CCDS DB by Nucleotide ID:ENST00000377671Re-query CCDS DB by Protein ID:ENSP00000366899
Original member Current member EBI ENST00000396026.7 ENSP00000400897.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396026.7Link to Ensembl Protein Viewer:ENSP00000400897.3Re-query CCDS DB by Nucleotide ID:ENST00000396026Re-query CCDS DB by Protein ID:ENSP00000400897
Original member Current member NCBI NM_001083330.4 NP_001076799.2 Accepted alive Link to Nucleotide Sequence:NM_001083330.4Link to Protein Sequence:NP_001076799.2Re-query CCDS DB by Nucleotide ID:NM_001083330Re-query CCDS DB by Protein ID:NP_001076799Link to BLAST:NP_001076799.2
Original member Current member NCBI NM_001282995.3 NP_001269924.2 Accepted alive Link to Nucleotide Sequence:NM_001282995.3Link to Protein Sequence:NP_001269924.2Re-query CCDS DB by Nucleotide ID:NM_001282995Re-query CCDS DB by Protein ID:NP_001269924Link to BLAST:NP_001269924.2
Original member Current member NCBI NM_001352451.2 NP_001339380.2 Accepted alive Link to Nucleotide Sequence:NM_001352451.2Link to Protein Sequence:NP_001339380.2Re-query CCDS DB by Nucleotide ID:NM_001352451Re-query CCDS DB by Protein ID:NP_001339380Link to BLAST:NP_001339380.2
Original member Current member NCBI NM_001352456.2 NP_001339385.2 Accepted alive Link to Nucleotide Sequence:NM_001352456.2Link to Protein Sequence:NP_001339385.2Re-query CCDS DB by Nucleotide ID:NM_001352456Re-query CCDS DB by Protein ID:NP_001339385Link to BLAST:NP_001339385.2
Original member Current member NCBI NM_001352457.2 NP_001339386.2 Accepted alive Link to Nucleotide Sequence:NM_001352457.2Link to Protein Sequence:NP_001339386.2Re-query CCDS DB by Nucleotide ID:NM_001352457Re-query CCDS DB by Protein ID:NP_001339386Link to BLAST:NP_001339386.2
Original member Current member NCBI NM_001352458.2 NP_001339387.2 Accepted alive Link to Nucleotide Sequence:NM_001352458.2Link to Protein Sequence:NP_001339387.2Re-query CCDS DB by Nucleotide ID:NM_001352458Re-query CCDS DB by Protein ID:NP_001339387Link to BLAST:NP_001339387.2
Original member Current member NCBI NM_001352459.2 NP_001339388.2 Accepted alive Link to Nucleotide Sequence:NM_001352459.2Link to Protein Sequence:NP_001339388.2Re-query CCDS DB by Nucleotide ID:NM_001352459Re-query CCDS DB by Protein ID:NP_001339388Link to BLAST:NP_001339388.2
Original member Current member NCBI NM_001387306.1 NP_001374235.1 Accepted alive Link to Nucleotide Sequence:NM_001387306.1Link to Protein Sequence:NP_001374235.1Re-query CCDS DB by Nucleotide ID:NM_001387306Re-query CCDS DB by Protein ID:NP_001374235Link to BLAST:NP_001374235.1
Original member Current member NCBI NM_001387307.1 NP_001374236.1 Accepted alive Link to Nucleotide Sequence:NM_001387307.1Link to Protein Sequence:NP_001374236.1Re-query CCDS DB by Nucleotide ID:NM_001387307Re-query CCDS DB by Protein ID:NP_001374236Link to BLAST:NP_001374236.1
Original member Current member NCBI NM_001387308.1 NP_001374237.1 Accepted alive Link to Nucleotide Sequence:NM_001387308.1Link to Protein Sequence:NP_001374237.1Re-query CCDS DB by Nucleotide ID:NM_001387308Re-query CCDS DB by Protein ID:NP_001374237Link to BLAST:NP_001374237.1
Original member Current member NCBI NM_001387309.1 NP_001374238.1 Accepted alive Link to Nucleotide Sequence:NM_001387309.1Link to Protein Sequence:NP_001374238.1Re-query CCDS DB by Nucleotide ID:NM_001387309Re-query CCDS DB by Protein ID:NP_001374238Link to BLAST:NP_001374238.1
Original member Current member NCBI NM_001387310.1 NP_001374239.1 Accepted alive Link to Nucleotide Sequence:NM_001387310.1Link to Protein Sequence:NP_001374239.1Re-query CCDS DB by Nucleotide ID:NM_001387310Re-query CCDS DB by Protein ID:NP_001374239Link to BLAST:NP_001374239.1
Original member Current member NCBI NM_001387311.1 NP_001374240.1 Accepted alive Link to Nucleotide Sequence:NM_001387311.1Link to Protein Sequence:NP_001374240.1Re-query CCDS DB by Nucleotide ID:NM_001387311Re-query CCDS DB by Protein ID:NP_001374240Link to BLAST:NP_001374240.1
Original member Current member NCBI NM_003434.7 NP_003425.3 Accepted alive Link to Nucleotide Sequence:NM_003434.7Link to Protein Sequence:NP_003425.3Re-query CCDS DB by Nucleotide ID:NM_003434Re-query CCDS DB by Protein ID:NP_003425Link to BLAST:NP_003425.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001076799.2 653 P52736-2 653 100% 0 0
NP_001269924.2 653 P52736-2 653 100% 0 0
NP_001339380.2 653 P52736-2 653 100% 0 0
NP_001339385.2 653 P52736-2 653 100% 0 0
NP_001339386.2 653 P52736-2 653 100% 0 0
NP_001339387.2 653 P52736-2 653 100% 0 0
NP_001339388.2 653 P52736-2 653 100% 0 0
NP_001374235.1 653 P52736-2 653 100% 0 0
NP_001374236.1 653 P52736-2 653 100% 0 0
NP_001374237.1 653 P52736-2 653 100% 0 0
NP_001374238.1 653 P52736-2 653 100% 0 0
NP_001374239.1 653 P52736-2 653 100% 0 0
NP_001374240.1 653 P52736-2 653 100% 0 0
NP_003425.3 653 P52736-2 653 100% 0 0

Chromosomal Locations for CCDS 13134.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 18305687 18305807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18306298 18306393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18315072 18316816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1962 nt):
ATGGCATTCAGGGATGTGGCTGTGGATTTCACCCAGGATGAGTGGAGGCTGCTGAGCCCTGCTCAAAGGA
CTCTGTACAGAGAGGTGATGCTGGAGAACTACAGCAACCTGGTCTCACTGGGAATTTCATTTTCTAAACC
AGAACTCATCACCCAGCTGGAGCAAGGGAAAGAGACCTGGAGAGAGGAAAAAAAATGTTCACCGGCAACC
TGTCCAGATCCAGAGCCAGAGCTCTACCTCGATCCTTTCTGCCCTCCGGGTTTCTCCAGTCAGAAATTCC
CCATGCAGCATGTGCTGTGTAATCATCCCCCCTGGATCTTCACATGCTTGTGTGCAGAAGGTAACATCCA
GCCTGGGGATCCGGGCCCAGGGGACCAGGAGAAGCAGCAACAAGCCTCTGAGGGGAGACCCTGGAGTGAT
CAAGCAGAAGGTCCTGAGGGAGAAGGTGCCATGCCTTTGTTTGGAAGAACCAAGAAAAGGACTCTGGGAG
CGTTCTCCAGGCCACCCCAGAGGCAGCCAGTCAGCTCTCGGAACGGCCTCAGAGGGGTGGAGTTAGAAGC
CAGCCCAGCTCAGTCAGGGAACCCTGAGGAAACAGACAAATTGTTGAAGAGGATAGAAGTCTTAGGATTT
GGAACAGTCAACTGTGGAGAGTGTGGACTGAGCTTCAGCAAGATGACAAACCTGCTCAGTCACCAGCGGA
TACACTCAGGGGAGAAGCCCTACGTGTGTGGGGTATGTGAGAAGGGCTTCAGCCTAAAGAAGAGCCTCGC
CAGACACCAGAAGGCACACTCGGGGGAGAAGCCAATTGTGTGCAGGGAGTGTGGACGAGGCTTTAACCGG
AAGTCAACGCTAATCATACACGAACGGACACACTCCGGTGAGAAACCTTACATGTGCAGTGAGTGTGGGC
GAGGCTTCAGCCAGAAGTCAAACCTCATCATACACCAGAGGACACACTCAGGGGAAAAGCCTTACGTGTG
CCGGGAATGTGGCAAAGGCTTCAGCCAGAAGTCAGCTGTCGTGAGACACCAGAGGACACACTTGGAGGAG
AAGACCATCGTGTGCAGTGACTGTGGCCTGGGCTTCAGCGACAGGTCAAACCTCATCTCCCACCAGAGGA
CGCACTCTGGGGAGAAGCCCTACGCCTGCAAGGAGTGTGGGCGATGCTTCAGGCAGAGGACCACCCTTGT
CAACCACCAGAGGACACACTCAAAGGAGAAGCCCTATGTGTGCGGGGTGTGTGGGCACAGCTTCAGCCAG
AATTCAACCCTCATCTCTCACAGGCGGACACACACTGGGGAGAAGCCGTATGTTTGTGGGGTGTGTGGGC
GAGGCTTTAGTCTCAAGTCACACCTCAACAGACACCAGAACATACACTCAGGAGAGAAGCCCATTGTGTG
CAAGGACTGTGGCCGGGGCTTCAGCCAGCAATCCAACCTCATCAGACACCAGAGGACGCACTCAGGCGAG
AAGCCCATGGTGTGTGGGGAGTGCGGGCGAGGCTTCAGCCAGAAGTCAAACCTTGTTGCACACCAGAGGA
CGCACTCAGGGGAGAGGCCGTATGTGTGCCGAGAGTGCGGGCGAGGCTTTAGCCACCAGGCCGGTCTCAT
CAGGCACAAGCGGAAGCACTCGAGGGAGAAGCCCTACATGTGCAGGCAGTGTGGACTGGGCTTTGGCAAT
AAGTCAGCTCTAATTACACACAAGCGGGCTCACTCGGAAGAGAAGCCTTGTGTGTGCAGAGAGTGTGGCC
AAGGCTTTCTCCAAAAGTCACACCTCACCTTACATCAAATGACACATACGGGGGAGAAGCCATATGTGTG
CAAGACGTGTGGGCGGGGCTTCAGCCTCAAGTCTCACCTCAGCAGACACAGGAAGACCACGTCTGTCCAC
CACAGACTGCCAGTGCAGCCCGACCCTGAGCCGTGTGCAGGGCAACCTTCGGATTCCTTATACTCTCTCT
GA

Translation (653 aa):
MAFRDVAVDFTQDEWRLLSPAQRTLYREVMLENYSNLVSLGISFSKPELITQLEQGKETWREEKKCSPAT
CPDPEPELYLDPFCPPGFSSQKFPMQHVLCNHPPWIFTCLCAEGNIQPGDPGPGDQEKQQQASEGRPWSD
QAEGPEGEGAMPLFGRTKKRTLGAFSRPPQRQPVSSRNGLRGVELEASPAQSGNPEETDKLLKRIEVLGF
GTVNCGECGLSFSKMTNLLSHQRIHSGEKPYVCGVCEKGFSLKKSLARHQKAHSGEKPIVCRECGRGFNR
KSTLIIHERTHSGEKPYMCSECGRGFSQKSNLIIHQRTHSGEKPYVCRECGKGFSQKSAVVRHQRTHLEE
KTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACKECGRCFRQRTTLVNHQRTHSKEKPYVCGVCGHSFSQ
NSTLISHRRTHTGEKPYVCGVCGRGFSLKSHLNRHQNIHSGEKPIVCKDCGRGFSQQSNLIRHQRTHSGE
KPMVCGECGRGFSQKSNLVAHQRTHSGERPYVCRECGRGFSHQAGLIRHKRKHSREKPYMCRQCGLGFGN
KSALITHKRAHSEEKPCVCRECGQGFLQKSHLTLHQMTHTGEKPYVCKTCGRGFSLKSHLSRHRKTTSVH
HRLPVQPDPEPCAGQPSDSLYSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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