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Report for CCDS12851.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12851.1 Public Homo sapiens 19 ZNF610 24 110 108 CCDS HistoryNCBI Gene:162963Re-query CCDS DB by CCDS ID:12851.1Re-query CCDS DB by GeneID:162963See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12851.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321287.12 ENSP00000324441.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321287.12Link to Ensembl Protein Viewer:ENSP00000324441.8Re-query CCDS DB by Nucleotide ID:ENST00000321287Re-query CCDS DB by Protein ID:ENSP00000324441
Original member Current member EBI ENST00000327920.12 ENSP00000327597.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000327920.12Link to Ensembl Protein Viewer:ENSP00000327597.7Re-query CCDS DB by Nucleotide ID:ENST00000327920Re-query CCDS DB by Protein ID:ENSP00000327597
Original member Current member EBI ENST00000403906.8 ENSP00000383922.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000403906.8Link to Ensembl Protein Viewer:ENSP00000383922.2Re-query CCDS DB by Nucleotide ID:ENST00000403906Re-query CCDS DB by Protein ID:ENSP00000383922
Original member Current member EBI ENST00000616431.2 ENSP00000485001.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616431.2Link to Ensembl Protein Viewer:ENSP00000485001.1Re-query CCDS DB by Nucleotide ID:ENST00000616431Re-query CCDS DB by Protein ID:ENSP00000485001
Original member Current member NCBI NM_001161425.2 NP_001154897.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001161425.2Link to Protein Sequence:NP_001154897.1Re-query CCDS DB by Nucleotide ID:NM_001161425Re-query CCDS DB by Protein ID:NP_001154897Link to BLAST:NP_001154897.1
Original member Current member NCBI NM_001161426.2 NP_001154898.1 Accepted alive Link to Nucleotide Sequence:NM_001161426.2Link to Protein Sequence:NP_001154898.1Re-query CCDS DB by Nucleotide ID:NM_001161426Re-query CCDS DB by Protein ID:NP_001154898Link to BLAST:NP_001154898.1
Original member Current member NCBI NM_173530.3 NP_775801.2 Accepted alive Link to Nucleotide Sequence:NM_173530.3Link to Protein Sequence:NP_775801.2Re-query CCDS DB by Nucleotide ID:NM_173530Re-query CCDS DB by Protein ID:NP_775801Link to BLAST:NP_775801.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001154897.1 462 Q8N9Z0-1 462 100% 0 0
NP_001154898.1 462 Q8N9Z0-1 462 100% 0 0
NP_775801.2 462 Q8N9Z0-1 462 100% 0 0

Chromosomal Locations for CCDS 12851.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52349173 52349235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52353682 52353808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52354251 52354379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52365698 52366767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1389 nt):
ATGCTATGTGATGAAGAAGCCCAGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGGACGCT
TGACATTCATGGACGTGGCCATCGAATTCTCTCAGGAGGAGTGGAAATCCCTGGACCCTGGACAGAGGGC
TTTATACAGGGACGTGATGTTGGAGAACTACAGGAACCTGGTCTTTCTGGGAATCTGTCTTCCTGACCTA
AGTATTATTTCCATGTTGAAGCAAAGGAGAGAGCCCTTGATTCTGCAAAGTCAAGTTAAAATAGTAAAAA
ATACAGATGGAAGGGAATGTGTCAGAAGCGTGAACACAGGGAGGAGCTGTGTATTGGGAAGCAATGCAGA
AAACAAGCCTATTAAAAATCAACTTGGATTAACCCTTGAGGCACATCTGTCTGAATTGCAGCTGTTTCAA
GCCGGAAGGAAAATTTACAGAAGTAATCAAGTTGAAAAGTTTACAAACCATCGTTCCTCAGTTTCACCAC
TTCAAAAAATTTCTTCTAGTTTCACAACACACATTTTTAATAAATATAGAAATGATCTTATTGATTTCCC
ATTACTCCCACAAGAAGAGAAAGCATACATTAGAGGAAAATCTTATGAATATGAATGTAGTGAAGATGGT
GAAGTTTTTAGAGTCCGTGCAAGCCTTACTAACCATCAAGTAATCCATACTGCAGAGAAACCTTACAAAT
GTACTGAATGTGGCAAGGTCTTCAGTCGCAATTCACACCTTGTAGAACATTGGAGAATTCATACTGGACA
GAAGCCTTACAAATGTAGTGAATGTGACAAGGTGTTTAATCGCAATTCAAACCTTGCACGACATCAAAGA
ATTCATACTGGAGAGAAGCCTCACAAATGTAACGAATGTGGCAAAGCTTTTAGAGAGTGTTCGGGACTTA
CTACCCATCTTGTAATCCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGAACTTCAGGCA
CAAATTTTCTCTAACCAATCATCAGAGAAGTCACACGGCGGAAAAACCTTACAAATGTAATGAATGTGGC
AAGGTCTTTAGTCTGCTTTCATACCTTGCACGGCATCAAATAATTCATAGTACAGAGAAGCCCTACAAAT
GTAACGAATGTGGAAGAGCATTTCACAAGCGTCCGGGCCTTATGGCCCATCTTCTAATCCATACTGGAGA
GAAACCTTACAAATGTAATGAATGTGACAAAGTCTTTGGGCGCAAATTATACCTAACCAACCATCAGAGA
ATTCATACTGGAGAGAGACCTTACAAGTGTAATGCATGTGGCAAGGTCTTCAATCAAAATCCACACCTTT
CACGACATCGGAAAATTCATGCTGGAGAGAATTCACTGCGTACCTTACAGATGGAATGA

Translation (462 aa):
MLCDEEAQKRKAKESGMALPQGRLTFMDVAIEFSQEEWKSLDPGQRALYRDVMLENYRNLVFLGICLPDL
SIISMLKQRREPLILQSQVKIVKNTDGRECVRSVNTGRSCVLGSNAENKPIKNQLGLTLEAHLSELQLFQ
AGRKIYRSNQVEKFTNHRSSVSPLQKISSSFTTHIFNKYRNDLIDFPLLPQEEKAYIRGKSYEYECSEDG
EVFRVRASLTNHQVIHTAEKPYKCTECGKVFSRNSHLVEHWRIHTGQKPYKCSECDKVFNRNSNLARHQR
IHTGEKPHKCNECGKAFRECSGLTTHLVIHTGEKPYKCNECGKNFRHKFSLTNHQRSHTAEKPYKCNECG
KVFSLLSYLARHQIIHSTEKPYKCNECGRAFHKRPGLMAHLLIHTGEKPYKCNECDKVFGRKLYLTNHQR
IHTGERPYKCNACGKVFNQNPHLSRHRKIHAGENSLRTLQME


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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