NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12846.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12846.1 Public Homo sapiens 19 ZNF615 24 110 108 CCDS HistoryNCBI Gene:284370Re-query CCDS DB by CCDS ID:12846.1Re-query CCDS DB by GeneID:284370See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12846.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376716.9 ENSP00000365906.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376716.9Link to Ensembl Protein Viewer:ENSP00000365906.4Re-query CCDS DB by Nucleotide ID:ENST00000376716Re-query CCDS DB by Protein ID:ENSP00000365906
Original member Current member EBI ENST00000602063.5 ENSP00000473089.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000602063.5Link to Ensembl Protein Viewer:ENSP00000473089.1Re-query CCDS DB by Nucleotide ID:ENST00000602063Re-query CCDS DB by Protein ID:ENSP00000473089
Original member Current member NCBI NM_001321320.2 NP_001308249.1 Accepted alive Link to Nucleotide Sequence:NM_001321320.2Link to Protein Sequence:NP_001308249.1Re-query CCDS DB by Nucleotide ID:NM_001321320Re-query CCDS DB by Protein ID:NP_001308249Link to BLAST:NP_001308249.1
Original member Current member NCBI NM_198480.4 NP_940882.3 Accepted alive Link to Nucleotide Sequence:NM_198480.4Link to Protein Sequence:NP_940882.3Re-query CCDS DB by Nucleotide ID:NM_198480Re-query CCDS DB by Protein ID:NP_940882Link to BLAST:NP_940882.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308249.1 731 Q8N8J6-1 731 100% 0 0
NP_940882.3 731 Q8N8J6-1 731 100% 0 0

Chromosomal Locations for CCDS 12846.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51992880 51994837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52001813 52001908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52002155 52002281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52003697 52003711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2196 nt):
ATGATGCAGGCCCAGGAATCCCTAACACTGGAGGATGTGGCTGTGGACTTCACCTGGGAGGAGTGGCAGT
TCCTGAGCCCTGCTCAGAAGGACCTGTACCGGGACGTGATGTTGGAGAACTACAGCAACCTGGTGGCAGT
GGGGTATCAAGCCAGCAAACCAGATGCACTCTCCAAATTGGAACGAGGAGAAGAAACTTGCACAACAGAA
GATGAAATCTACTCTCGAATCTGTTCTGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAA
ATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGAATATGTTTGGAAATATTGTTAATCAGAA
CAAAGGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTTGACTTACATGAAAAACCTTTAAAATCAAAT
TTAAGTTTTGAAAACCAGAAAAGGAGCTCTGGCCTAAAGAACTCTGCTGAGTTTAATAGAGATGGGAAAT
CCCTTTTTCATGCTAACCATAAACAATTTTATACTGAAATGAAGTTTCCTGCAATTGCAAAACCTATTAA
TAAGTCCCAGTTCATTAAGCAACAGAGAACTCACAACATAGAGAATGCCCATGTATGCAGTGAATGTGGG
AAAGCCTTCCTCAAGTTGTCTCAGTTTATTGATCATCAGAGAGTTCACACTGGAGAAAAACCTCATGTAT
GCAGTATGTGTGGGAAAGCTTTCTCCAGAAAATCCAGACTAATGGACCATCAGAGAACTCATACAGAACT
GAAACATTATGAATGCACTGAATGTGACAAAACCTTCCTCAAGAAATCACAGCTCAATATACATCAGAAA
ACTCATATGGGAGGGAAACCTTACACATGTAGCCAATGTGGGAAAGCCTTCATCAAGAAGTGTCGGCTCA
TTTATCATCAACGAACTCATACAGGAGAGAAACCCCATGGATGCAGTGTATGTGGGAAGGCCTTCTCTAC
AAAGTTCAGTCTCACTACACATCAGAAAACTCATACAGGAGAAAAACCTTATATATGTAGTGAATGTGGA
AAAGGCTTCATTGAGAAGAGGCGTCTTACTGCACATCATCGAACTCATACTGGTGAGAAACCCTTTATAT
GCAATAAATGTGGGAAAGGCTTCACCTTGAAGAACAGTCTTATCACACATCAGCAAACTCATACAGGAGA
GAAATTATATACATGTAGTGAATGTGGAAAAGGCTTTTCAATGAAGCACTGTCTCATGGTACATCAACGA
ACTCATACTGGAGAGAAACCTTATAAATGCAATGAGTGTGGAAAGGGCTTCGCTTTGAAGAGCCCACTCA
TCAGACATCAGCGAACACATACTGGAGAGAAACCCTATGTATGCACCGAATGTCGAAAAGGTTTCACCAT
GAAGAGTGACCTCATTGTACATCAGCGAACTCATACTGCAGAGAAGCCATATATATGCAATGATTGTGGA
AAAGGCTTCACTGTGAAGAGCCGCCTTATTGTGCATCAGCGAACTCATACTGGAGAAAAACCCTATGTAT
GTGGTGAGTGTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGGGACATCAACGAACTCATACAGGAGA
GAAACCTTATATTTGCAATGAGTGTGGAAAAGGCTTCACTGAGAAGAGTCATCTCAATGTACATCGGCGC
ACTCATACAGGAGAGAAACCCTATGTATGCAGTGAATGTGGCAAAGGCTTAACTGGGAAAAGCATGCTCA
TTGCACATCAGCGAACTCATACTGGGGAGAAACCTTATATATGCAATGAATGTGGAAAGGGCTTCACCAT
GAAGAGTACTCTCAGTATACATCAGCAAACTCATACTGGAGAGAAGCCATACAAATGCAATGAATGTGAT
AAAACCTTCAGGAAGAAGACATGCCTCATACAACATCAGCGATTTCACACAGGAAAGACTTCCTTTGCAT
GTACTGAATGTGGAAAATTCTCTTTGCGCAAAAATGATCTTATTACACATCAGAGAATTCACACAGGAGA
GAAACCGTACAAATGCAGTGACTGCGGGAAAGCCTTCACTACAAAATCAGGGCTCAATGTTCATCAAAGA
AAACATACAGGAGAGAGGCCCTATGGATGTAGTGATTGTGGGAAAGCTTTTGCGCACTTGTCTATCCTTG
TTAAACACAGGAGAATTCACAGGTAG

Translation (731 aa):
MMQAQESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVAVGYQASKPDALSKLERGEETCTTE
DEIYSRICSEIRKIDDPLQHHLQNQSIQKSVKQCHEQNMFGNIVNQNKGHFLLKQDCDTFDLHEKPLKSN
LSFENQKRSSGLKNSAEFNRDGKSLFHANHKQFYTEMKFPAIAKPINKSQFIKQQRTHNIENAHVCSECG
KAFLKLSQFIDHQRVHTGEKPHVCSMCGKAFSRKSRLMDHQRTHTELKHYECTECDKTFLKKSQLNIHQK
THMGGKPYTCSQCGKAFIKKCRLIYHQRTHTGEKPHGCSVCGKAFSTKFSLTTHQKTHTGEKPYICSECG
KGFIEKRRLTAHHRTHTGEKPFICNKCGKGFTLKNSLITHQQTHTGEKLYTCSECGKGFSMKHCLMVHQR
THTGEKPYKCNECGKGFALKSPLIRHQRTHTGEKPYVCTECRKGFTMKSDLIVHQRTHTAEKPYICNDCG
KGFTVKSRLIVHQRTHTGEKPYVCGECGKGFPAKIRLMGHQRTHTGEKPYICNECGKGFTEKSHLNVHRR
THTGEKPYVCSECGKGLTGKSMLIAHQRTHTGEKPYICNECGKGFTMKSTLSIHQQTHTGEKPYKCNECD
KTFRKKTCLIQHQRFHTGKTSFACTECGKFSLRKNDLITHQRIHTGEKPYKCSDCGKAFTTKSGLNVHQR
KHTGERPYGCSDCGKAFAHLSILVKHRRIHR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH