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Report for CCDS12633.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12633.1 |
Public |
Homo sapiens |
19 |
ZNF221 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:7638](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:12633.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:7638](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12633.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000251269.9 |
ENSP00000251269.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000251269.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000251269.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000251269](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000251269](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000587682.6 |
ENSP00000467367.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000587682.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000467367.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000587682](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000467367](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000592350.5 |
ENSP00000467446.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000592350.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000467446.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000592350](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000467446](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000622072.1 |
ENSP00000477876.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000622072.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000477876.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000622072](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000477876](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001297588.2 |
NP_001284517.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001297588.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001284517.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001297588](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001284517](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001284517.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001297589.2 |
NP_001284518.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001297589.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001284518.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001297589](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001284518](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001284518.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_013359.3 |
NP_037491.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_013359.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_037491.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_013359](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_037491](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_037491.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 12633.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1854 nt): ATGATTTCACCTTCACTTGAACTGCTTCATTCAGGACTCTGCAAATTCCCTGAAGTAGAAGGAAAAATGA CCACATTCAAAGAGGCAGTGACATTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTAGAGAACTTCAGGAACCTGCTCTCAGTAGGG AATCAACCATTCCACCAAGATACTTTCCACTTCTTAGGGAAGGAAAAGTTTTGGAAGATGAAGACAACAA GCCAAAGAGAAGGGAATTCAGGAGGCAAGATCCAAATTGAGATGGAGACTGTTCCAGAAGCAGGACCACA TGAAGAGTGGTCCTGTCAGCAAATATGGGAACAAATTGCAAGTGACCTAACCAGGTCTCAAAACTCCATA AGGAACAGCTCTCAGTTCTTCAAAGAAGGTGATGTCCCCTGCCAGATTGAGGCAAGACTATCTATAAGTC ACGTGCAACAGAAACCTTACCGTTGTAATGAATGTAAACAGTCCTTCAGTGATGTTTCTGTCTTTGATCT TCATCAACAATCACACTCAGGAGAGAAATCTCATACATGTGGTGAGTGTGGAAAAAGCTTCTGTTACAGC CCAGCCCTTCATATTCATCAGAGAGTCCATATGGGAGAAAAATGCTATAAGTGTGATGTGTGTGGTAAGG AATTTAATCAGAGCTCACATCTGCAAACTCATCAGAGAGTCCATACTGGAGAGAAACCATTCAAATGTGG GCAATGTGGGAAAGGCTTCCATAGTAGATCAGCACTTAATGTTCATTGCAAATTGCACACAGGAGAGAAA CCTTATAATTGTGAGGAATGTGGGAAAGCCTTCATTCATGATTCACAGCTTCAAGAACATCAGAGAATCC ATACTGGGGAGAAGCCATTCAAATGTGATATATGTGGTAAGAGCTTCCGTGTTAGATCAAGACTTAATAG GCATTCCATGGTTCACACAGGAGAAAAACCATTCAGATGTGATACATGTGGCAAGAACTTTCGTCAGAGA TCAGCACTTAATAGTCATTCCATGGTCCACATAGAAGAGAAGCCATACAAATGTGAGCAATGTGGAAAAG GCTTCATTTGTAGGCGAGATTTTTGTAAGCATCAGATGGTCCACACAGGAGAGAAACCATATAATTGTAA AGAATGTGGGAAGACCTTCAGATGGTCCTCATGTCTTTTGAACCATCAGCAAGTCCACAGTGGACAAAAA TCCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACGACGATCTTCCCATCAGAGATCCC ACAATGGAGAAAAGCCATATAACTGTGAGGAGTGTGGTAAGGACTATAAAAGGAGGTTGGATCTTGAGTT TCACCAGAGGGTCCACACGGGTGAGAGACCCTATAATTGTAAGGAATGTGGCAAGAGCTTTGGCTGGGCC TCCTGTCTTTTGAAACATCAGAGACTCCACAGTGGGGAAAAACCTTTCAAATGTGAAGAGTGTGGAAAGA GATTTACTCAGAGTTCACAACTTCATTCCCATCAGACATGCCATACTGGAGAAAAGCTATACAAATGTGA GCAGTGTGAGAAGGGGTACAACAGTAAATTTAATCTTGACATGCACCAGAGGGTCCACGGGGGAGAGCGA CCCTATAATTGTAAGGAATGTGGAAAGAGCTTTGGCTGGGCTTCATGTCTTTTGAAACATCAGAGACTCC ACAGTGGAGAAAAGCCATTGAAATCTGGAGTGTGGGAAGAGATCTACTCAGAATTCACAGCTTCATTTAC ATCAGTAAGTCTATGTGGGAGAAAAGCCATATAA
Translation (617 aa): MISPSLELLHSGLCKFPEVEGKMTTFKEAVTFKDVAVVFTEEELGLLDPAQRKLYRDVMLENFRNLLSVG NQPFHQDTFHFLGKEKFWKMKTTSQREGNSGGKIQIEMETVPEAGPHEEWSCQQIWEQIASDLTRSQNSI RNSSQFFKEGDVPCQIEARLSISHVQQKPYRCNECKQSFSDVSVFDLHQQSHSGEKSHTCGECGKSFCYS PALHIHQRVHMGEKCYKCDVCGKEFNQSSHLQTHQRVHTGEKPFKCGQCGKGFHSRSALNVHCKLHTGEK PYNCEECGKAFIHDSQLQEHQRIHTGEKPFKCDICGKSFRVRSRLNRHSMVHTGEKPFRCDTCGKNFRQR SALNSHSMVHIEEKPYKCEQCGKGFICRRDFCKHQMVHTGEKPYNCKECGKTFRWSSCLLNHQQVHSGQK SFKCEECGKGFYTNSRRSSHQRSHNGEKPYNCEECGKDYKRRLDLEFHQRVHTGERPYNCKECGKSFGWA SCLLKHQRLHSGEKPFKCEECGKRFTQSSQLHSHQTCHTGEKLYKCEQCEKGYNSKFNLDMHQRVHGGER PYNCKECGKSFGWASCLLKHQRLHSGEKPLKSGVWEEIYSEFTASFTSVSLCGRKAI
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