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Report for CCDS12492.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12492.1 Public Homo sapiens 19 ZNF146 24 110 108 CCDS HistoryNCBI Gene:7705Re-query CCDS DB by CCDS ID:12492.1Re-query CCDS DB by GeneID:7705See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12492.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443387.3 ENSP00000392095.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443387.3Link to Ensembl Protein Viewer:ENSP00000392095.1Re-query CCDS DB by Nucleotide ID:ENST00000443387Re-query CCDS DB by Protein ID:ENSP00000392095
Original member Current member EBI ENST00000456324.5 ENSP00000400391.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456324.5Link to Ensembl Protein Viewer:ENSP00000400391.1Re-query CCDS DB by Nucleotide ID:ENST00000456324Re-query CCDS DB by Protein ID:ENSP00000400391
Original member Current member NCBI NM_001099638.2 NP_001093108.1 Accepted alive Link to Nucleotide Sequence:NM_001099638.2Link to Protein Sequence:NP_001093108.1Re-query CCDS DB by Nucleotide ID:NM_001099638Re-query CCDS DB by Protein ID:NP_001093108Link to BLAST:NP_001093108.1
Original member Current member NCBI NM_001099639.2 NP_001093109.1 Accepted alive Link to Nucleotide Sequence:NM_001099639.2Link to Protein Sequence:NP_001093109.1Re-query CCDS DB by Nucleotide ID:NM_001099639Re-query CCDS DB by Protein ID:NP_001093109Link to BLAST:NP_001093109.1
Original member Current member NCBI NM_007145.3 NP_009076.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007145.3Link to Protein Sequence:NP_009076.2Re-query CCDS DB by Nucleotide ID:NM_007145Re-query CCDS DB by Protein ID:NP_009076Link to BLAST:NP_009076.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093108.1 292 Q15072 292 100% 0 0
NP_001093109.1 292 Q15072 292 100% 0 0
NP_009076.2 292 Q15072 292 100% 0 0

Chromosomal Locations for CCDS 12492.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36236441 36237319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGTCACACCTCAGCCAGCAGAGAATTTACAGTGGGGAAAACCCCTTTGCCTGTAAGGTATGTGGAAAAG
TCTTCAGCCACAAATCAAACCTCACTGAGCATGAGCATTTTCACACGAGAGAGAAACCTTTTGAATGTAA
CGAGTGTGGAAAAGCCTTTAGCCAAAAGCAGTATGTCATTAAACATCAGAACACCCATACTGGCGAGAAG
CTTTTCGAATGTAATGAATGTGGAAAATCATTTAGCCAGAAGGAAAACCTCCTTACGCACCAGAAAATTC
ACACTGGAGAAAAACCTTTTGAGTGTAAAGATTGCGGGAAAGCTTTCATTCAGAAGTCAAACCTCATCAG
ACACCAGAGAACTCACACAGGAGAGAAGCCCTTTGTATGTAAGGAGTGTGGAAAAACCTTCAGTGGCAAA
TCCAACCTTACTGAGCATGAGAAAATCCATATTGGAGAGAAGCCTTTTAAATGTAGTGAATGTGGAACAG
CCTTTGGCCAGAAGAAGTACCTCATAAAACATCAGAACATTCACACTGGAGAGAAACCCTATGAATGTAA
CGAATGTGGAAAAGCCTTCTCTCAGCGAACATCACTTATTGTACATGTGAGGATTCATTCAGGTGATAAA
CCTTACGAATGCAATGTTTGTGGAAAAGCCTTCTCTCAGAGCTCATCTCTCACTGTGCATGTGAGAAGCC
ATACAGGGGAGAAGCCCTATGGTTGTAATGAATGTGGGAAAGCTTTCTCTCAGTTCTCAACCCTTGCTCT
GCATTTGAGAATACACACAGGTAAGAAGCCTTATCAGTGCAGTGAATGTGGGAAAGCTTTCAGCCAGAAG
TCACACCACATTAGACACCAGAAAATTCATACTCACTAA

Translation (292 aa):
MSHLSQQRIYSGENPFACKVCGKVFSHKSNLTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEK
LFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGK
SNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDK
PYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIHTGKKPYQCSECGKAFSQK
SHHIRHQKIHTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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