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Report for CCDS12412.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12412.1 Public Homo sapiens 19 ZNF493 24 110 108 CCDS HistoryNCBI Gene:284443Re-query CCDS DB by CCDS ID:12412.1Re-query CCDS DB by GeneID:284443See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12412.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355504.4 ENSP00000347691.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355504.4Link to Ensembl Protein Viewer:ENSP00000347691.4Re-query CCDS DB by Nucleotide ID:ENST00000355504Re-query CCDS DB by Protein ID:ENSP00000347691
Original member Current member NCBI NM_175910.7 NP_787106.4 Accepted alive Link to Nucleotide Sequence:NM_175910.7Link to Protein Sequence:NP_787106.4Re-query CCDS DB by Nucleotide ID:NM_175910Re-query CCDS DB by Protein ID:NP_787106Link to BLAST:NP_787106.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_787106.4 646 Q6ZR52-1 646 100% 0 0

Chromosomal Locations for CCDS 12412.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21423044 21424984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1941 nt):
ATGAATGAGTGTAATGTGCACAAAGAAGGTTATAATGAACTAAACCAGTATTTGACAACTACCCAGAGCA
AAATATTTCAATGTGATAAATATGTGAAAGTCTTTCATAAACTTTTAAATTCAAATAGACATAACACAAA
ACATACTGGAAAGAAACCTTTCAAATGTAAAAAATGTGGCAAATCATTTTGCATGCTTTTACACCTATGT
CAGCATAAAAGAATTCATATTAGAGAGAATTCTTACCGATGTGAAGAATGTGGCAAAGCCTTTATCTGGT
TTTCAACCCTTACTAGACACAGGAGAGTTCATACTGGAGAGAAATCCTACAAATATGAATGTGGCAAATC
TTTTAACCAGGACTCAAACCTTACTACACATAAGAGAATTCATACTGGACAGAAACCCTACAAATGTGAA
GAATGTGGCACATCTTTCTACCAATTCTCATACCTTACTAGGCATAAGCTAATTCATACTAGAGAGAAAC
CCTATAAATGTGAACAATATGGCAAAACTTTTAACCAATCTTCAACCCTTACTGGACATAAGATAATTCA
TAATGGAGAAAAACCCTATAAATGTGAAGAATGTGGCAAAGCCTTTAGTATTTTCTCAACCCCTACTAAA
CATAAGATAATTCACACTGAAGAGAAATCCCACAGATGTGAAGAATATTGCAAAGCTTATAAGGAGTCCT
CACACCTTACTACACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGC
CTTTAGTATTTTCTCAACCCTTACTAAACATAAGATAATTCACACTGAAGAGAAATCCCACAGATGTGAA
GAATGTGGCAAAGCTTATAAGGAGTCTTCACACCTTACTACACATAAAAGAATTCATACTGGAGAGAAAC
CCTACAAATGTGAAGAATGTGGCAAAACCTTTAGTGTATTCTCAATTCTTACTAAACATAAAATAATTCA
TACAGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACGATCTTCAACCCTTACTAAA
CATAGGATAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAATCTT
CAACCCTTAGTATACATAAAATAATTCATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGC
TTTTAAACGATCTTCAACCCTTACTATACATAAAATGATTCACACTGGAGAAAAACCCTACAAATGTGAA
GAATGTGGCAAAGCTTTTAATCGGTCCTCACACCTTACTACACATAAGAGAATTCATACTGGACACAAAC
CCTACAAATGTAAAGAATGTGGCAAATCCTTTAGTGTATTCTCAACCCTTACTAAACACAAGATAATTCA
TACTGATAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGATCTTCAATCCTTAGTATA
CATAAGAAAATTCATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAGCGGTCCT
CACACCTCGCTGGGCACAAGCAAATTCATAGTGTACAAAAACCCTACAAATGTGAAGAATGTGGCAAAGC
CTTTAGTATATTCTCAACCCTTACTAAACATAAGATAATTCATACTGAAGAGAAACCCTACAAATGTGAA
AAATGTGGCAAAACTTTCTACCGATTCTCAAACCTTAATACGCATAAGATAATTCATACTGGAGAGAAAC
CTTGCAAATGTGAAGAATGTGGCAAAGCTTTTAACCATTCCTCAAACCTTATTAAACATAAGCTAATTCA
TACTGGAGACAAACCCTACAAATGTGAAGCATGTGGCAAAGCTTTTAGGCGGTCTTCACATCTTAGTAGA
CATAAGATAATTCATATTGGAATTCATACTGAAGAGACTGTACAAAAGTGA

Translation (646 aa):
MNECNVHKEGYNELNQYLTTTQSKIFQCDKYVKVFHKLLNSNRHNTKHTGKKPFKCKKCGKSFCMLLHLC
QHKRIHIRENSYRCEECGKAFIWFSTLTRHRRVHTGEKSYKYECGKSFNQDSNLTTHKRIHTGQKPYKCE
ECGTSFYQFSYLTRHKLIHTREKPYKCEQYGKTFNQSSTLTGHKIIHNGEKPYKCEECGKAFSIFSTPTK
HKIIHTEEKSHRCEEYCKAYKESSHLTTHKRIHTGEKPYKCEECGKAFSIFSTLTKHKIIHTEEKSHRCE
ECGKAYKESSHLTTHKRIHTGEKPYKCEECGKTFSVFSILTKHKIIHTEEKPYKCEECGKAFKRSSTLTK
HRIIHTEEKPYKCEECGKAFNQSSTLSIHKIIHTGEKPYKCEECGKAFKRSSTLTIHKMIHTGEKPYKCE
ECGKAFNRSSHLTTHKRIHTGHKPYKCKECGKSFSVFSTLTKHKIIHTDKKPYKCEECGKAFNRSSILSI
HKKIHTGEKPYKCEECGKAFKRSSHLAGHKQIHSVQKPYKCEECGKAFSIFSTLTKHKIIHTEEKPYKCE
KCGKTFYRFSNLNTHKIIHTGEKPCKCEECGKAFNHSSNLIKHKLIHTGDKPYKCEACGKAFRRSSHLSR
HKIIHIGIHTEETVQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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