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Report for CCDS1236.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1236.1 Public Homo sapiens 1 OLFML2B 24 110 108 CCDS HistoryNCBI Gene:25903Re-query CCDS DB by CCDS ID:1236.1Re-query CCDS DB by GeneID:25903See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1236.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294794.8 ENSP00000294794.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000294794.8Link to Ensembl Protein Viewer:ENSP00000294794.3Re-query CCDS DB by Nucleotide ID:ENST00000294794Re-query CCDS DB by Protein ID:ENSP00000294794
Original member Current member NCBI NM_015441.3 NP_056256.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015441.3Link to Protein Sequence:NP_056256.1Re-query CCDS DB by Nucleotide ID:NM_015441Re-query CCDS DB by Protein ID:NP_056256Link to BLAST:NP_056256.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056256.1 750 Q68BL8-1 750 100% 0 0

Chromosomal Locations for CCDS 1236.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 161983675 161984276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161984804 161984980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161997825 161998349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162000113 162000338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162006297 162006473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162017400 162017507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162019919 162020182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162023257 162023430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2253 nt):
ATGGCCAAGCCTCGGCTGCTAGTTCTCTACTTCGCTCTGATTGTGGTTCCGGCCTGGGTGTCCAGCATTG
TCCTCACAGGGACAAGCGAGCCCCCAGATGCGCAGACAGTGGCGCCTGCGGAGGACGAGACTCTGCAAAA
CGAGGCGGACAACCAGGAGAACGTTTTATCTCAGTTGCTGGGGGACTATGACAAGGTCAAGGCTATGTCT
GAGGGCTCGGACTGTCAGTGCAAGTGTGTGGTGAGACCCCTGGGCCGGGATGCCTGCCAGAGGATCAATG
CGGGGGCCTCCAGGAAGGAAGACTTCTATACCGTGGAAACCATCACCTCAGGCTCGTCGTGCAAGTGTGC
CTGTGTAGCACCCCCATCGGCCCTCAATCCCTGCGAGGGAGACTTCAGGCTCCAGAAGCTGCGGGAGGCA
GACAGCCAGGACTTGAAGCTCTCCACAATCATAGACATGTTGGAAGGAGCGTTCTATGGCCTGGATCTCC
TGAAGCTACATTCAGTCACCACCAAACTGGTGGGGCGAGTGGATAAACTGGAGGAGGAAGTGTCTAAAAA
CCTCACCAAGGAAAATGAACAAATCAAAGAGGACATGGAAGAAATTCGAACCGAGATGAATAAGCGAGGC
AAAGAAAATTGCTCTGAAAACATCCTAGATAGCATGCCAGACATCCGCTCAGCCCTGCAGAGGGATGCAG
CAGCAGCCTACGCCCACCCAGAGTATGAAGAGCGGTTTCTGCAGGAAGAAACCGTGTCCCAGCAGATCAA
CTCCATCGAACTTCTGCAGACGCGACCCCTGGCTCTGCCTGAGGTGGTGAAGTCACAGCGGCCCCTGCAG
AGGCAGGTCCACCTGAGAGGCCGGCCGGCCTCCCAGCCCACTGTCATCCGGGGCATCACCTACTATAAAG
CCAAGGTCTCTGAAGAAGAGAATGACATTGAAGAGCAGCAAGATGAGTTTTTCAGCGGTGACAATGGAGT
GGATTTGCTGATTGAAGATCAGCTCCTGAGACACAACGGCCTGATGACCAGTGTCACCCGGAGGCCTGCA
GCCACCCGTCAGGGACACAGCACTGCTGTGACAAGCGACCTGAACGCTCGGACCGCACCCTGGTCCTCAG
CACTGCCACAGCCCTCGACCTCAGATCCCAGCATCGCCAACCATGCCTCAGTGGGACCAACACTCCAAAC
AACCTCGGTGTCTCCAGATCCCACAAGGGAGTCAGTCCTGCAGCCTTCTCCTCAGGTACCAGCCACCACT
GTGGCCCACACAGCCACCCAGCAACCAGCAGCCCCAGCTCCTCCGGCAGTGTCTCCCAGGGAGGCATTGA
TGGAAGCTATGCACACAGTCCCAGTGCCTCCCACCACAGTCAGAACAGACTCGCTGGGGAAAGATGCTCC
TGCTGGGTGGGGAACAACCCCTGCCAGCCCCACGCTGAGCCCCGAAGAAGAAGATGACATCCGGAATGTC
ATAGGAAGGTGCAAGGACACTCTCTCCACAATCACGGGGCCGACCACCCAGAACACATATGGGCGGAATG
AAGGGGCCTGGATGAAGGACCCCCTGGCCAAGGATGAGCGGATTTACGTAACCAACTATTACTACGGCAA
CACCCTGGTAGAGTTCCGGAACCTGGAGAACTTCAAACAAGGTCGCTGGAGCAATTCCTACAAGCTCCCG
TACAGCTGGATCGGCACAGGCCACGTGGTATACAATGGCGCCTTCTACTACAATCGCGCCTTCACCCGCA
ACATCATCAAGTACGACCTGAAGCAGCGCTACGTGGCTGCCTGGGCCATGCTGCATGACGTGGCCTACGA
GGAGGCCACCCCCTGGCGATGGCAGGGCCACTCAGACGTGGACTTTGCTGTGGACGAGAATGGCCTATGG
CTCATCTACCCGGCCCTGGACGATGAGGGCTTCAGCCAGGAGGTCATTGTCCTGAGCAAGCTCAATGCCG
CGGACCTGAGCACACAGAAGGAGACCACATGGCGCACGGGGCTCCGGAGGAATTTCTACGGCAACTGCTT
CGTCATCTGTGGGGTGCTGTATGCCGTGGATAGCTACAACCAGCGGAATGCCAACATCTCCTACGCTTTC
GACACCCACACCAACACACAGATCGTCCCCAGGCTGCTGTTCGAGAATGAGTATTCCTATACGACCCAGA
TAGACTACAACCCCAAGGACCGCCTGCTCTATGCCTGGGACAATGGCCACCAGGTCACTTACCATGTCAT
CTTTGCCTACTGA

Translation (750 aa):
MAKPRLLVLYFALIVVPAWVSSIVLTGTSEPPDAQTVAPAEDETLQNEADNQENVLSQLLGDYDKVKAMS
EGSDCQCKCVVRPLGRDACQRINAGASRKEDFYTVETITSGSSCKCACVAPPSALNPCEGDFRLQKLREA
DSQDLKLSTIIDMLEGAFYGLDLLKLHSVTTKLVGRVDKLEEEVSKNLTKENEQIKEDMEEIRTEMNKRG
KENCSENILDSMPDIRSALQRDAAAAYAHPEYEERFLQEETVSQQINSIELLQTRPLALPEVVKSQRPLQ
RQVHLRGRPASQPTVIRGITYYKAKVSEEENDIEEQQDEFFSGDNGVDLLIEDQLLRHNGLMTSVTRRPA
ATRQGHSTAVTSDLNARTAPWSSALPQPSTSDPSIANHASVGPTLQTTSVSPDPTRESVLQPSPQVPATT
VAHTATQQPAAPAPPAVSPREALMEAMHTVPVPPTTVRTDSLGKDAPAGWGTTPASPTLSPEEEDDIRNV
IGRCKDTLSTITGPTTQNTYGRNEGAWMKDPLAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLP
YSWIGTGHVVYNGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLW
LIYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQRNANISYAF
DTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIFAY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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