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Report for CCDS12357.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12357.1 Public Homo sapiens 19 DDA1 24 110 108 CCDS HistoryNCBI Gene:79016Re-query CCDS DB by CCDS ID:12357.1Re-query CCDS DB by GeneID:79016See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12357.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359866.9 ENSP00000352928.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359866.9Link to Ensembl Protein Viewer:ENSP00000352928.3Re-query CCDS DB by Nucleotide ID:ENST00000359866Re-query CCDS DB by Protein ID:ENSP00000352928
Original member Current member EBI ENST00000596582.1 ENSP00000472171.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000596582.1Link to Ensembl Protein Viewer:ENSP00000472171.1Re-query CCDS DB by Nucleotide ID:ENST00000596582Re-query CCDS DB by Protein ID:ENSP00000472171
Original member Current member EBI ENST00000593466.5 ENSP00000473086.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593466.5Link to Ensembl Protein Viewer:ENSP00000473086.1Re-query CCDS DB by Nucleotide ID:ENST00000593466Re-query CCDS DB by Protein ID:ENSP00000473086
Original member Current member NCBI NM_024050.6 NP_076955.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024050.6Link to Protein Sequence:NP_076955.1Re-query CCDS DB by Nucleotide ID:NM_024050Re-query CCDS DB by Protein ID:NP_076955Link to BLAST:NP_076955.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076955.1 102 Q9BW61 102 100% 0 0

Chromosomal Locations for CCDS 12357.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17309655 17309657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17314023 17314103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17314338 17314389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17315934 17315995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17319546 17319656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGGCAGATTTTTTGAAAGGACTGCCTGTCTACAACAAAAGCAATTTTAGTCGATTTCACGCGGACTCCG
TGTGCAAAGCCTCGAACCGACGGCCCTCAGTCTACCTGCCTACCCGCGAGTACCCGTCTGAACAGATCAT
CGTGACAGAAAAGACAAACATCCTCCTGCGCTACCTGCATCAGCAATGGGACAAAAAGAACGCTGCCAAG
AAGAGAGACCAGGAGCAAGTGGAGCTGGAAGGCGAGAGCTCCGCACCTCCCCGCAAGGTGGCGCGGACCG
ACAGCCCAGACATGCACGAGGACACTTAA

Translation (102 aa):
MADFLKGLPVYNKSNFSRFHADSVCKASNRRPSVYLPTREYPSEQIIVTEKTNILLRYLHQQWDKKNAAK
KRDQEQVELEGESSAPPRKVARTDSPDMHEDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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