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Report for CCDS12337.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12337.1 Public Homo sapiens 19 CYP4F11 24 110 108 CCDS HistoryNCBI Gene:57834Re-query CCDS DB by CCDS ID:12337.1Re-query CCDS DB by GeneID:57834See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12337.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248041.12 ENSP00000248041.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000248041.12Link to Ensembl Protein Viewer:ENSP00000248041.6Re-query CCDS DB by Nucleotide ID:ENST00000248041Re-query CCDS DB by Protein ID:ENSP00000248041
Original member Current member EBI ENST00000402119.9 ENSP00000384588.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402119.9Link to Ensembl Protein Viewer:ENSP00000384588.2Re-query CCDS DB by Nucleotide ID:ENST00000402119Re-query CCDS DB by Protein ID:ENSP00000384588
Original member Current member NCBI NM_001128932.2 NP_001122404.1 Accepted alive Link to Nucleotide Sequence:NM_001128932.2Link to Protein Sequence:NP_001122404.1Re-query CCDS DB by Nucleotide ID:NM_001128932Re-query CCDS DB by Protein ID:NP_001122404Link to BLAST:NP_001122404.1
Original member Current member NCBI NM_021187.4 NP_067010.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021187.4Link to Protein Sequence:NP_067010.3Re-query CCDS DB by Nucleotide ID:NM_021187Re-query CCDS DB by Protein ID:NP_067010Link to BLAST:NP_067010.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001122404.1 524 Q9HBI6 524 100% 0 0
NP_067010.3 524 Q9HBI6 524 100% 0 0

Chromosomal Locations for CCDS 12337.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15913732 15913909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15914305 15914387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15914602 15914666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15914762 15914895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15922037 15922166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15922364 15922430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15923812 15924082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15924761 15924882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15927212 15927339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15927430 15927483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15929457 15929601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15934211 15934408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGCCGCAGCTGAGCCTGTCCTGGCTGGGCCTCGGGCCCGTGGCAGCATCCCCGTGGCTGCTTCTGCTGC
TGGTTGGAGGCTCCTGGCTCCTGGCCCGCGTCCTGGCCTGGACCTACACCTTCTATGACAACTGCCGCCG
CCTCCAGTGTTTTCCTCAACCCCCGAAACAGAACTGGTTTTGGGGACACCAGGGCCTGGTCACTCCCACG
GAAGAGGGCATGAAGACATTGACCCAGCTGGTGACCACATATCCCCAGGGCTTTAAGTTGTGGCTGGGTC
CTACCTTCCCCCTCCTCATTTTATGCCACCCTGACATTATCCGGCCTATCACCAGTGCCTCAGCTGCTGT
CGCACCCAAGGATATGATTTTCTATGGCTTCCTGAAGCCCTGGCTGGGGGATGGGCTCCTGCTGAGTGGT
GGTGACAAGTGGAGCCGCCACCGTCGGATGTTGACGCCTGCCTTCCATTTCAACATCTTGAAGCCTTATA
TGAAGATTTTCAACAAGAGTGTGAACATCATGCACGACAAGTGGCAGCGCCTGGCCTCAGAGGGCAGCGC
CAGACTGGACATGTTTGAACACATCAGCCTCATGACCTTGGACAGTCTGCAGAAATGTGTCTTCAGCTTT
GAAAGCAATTGTCAGGAGAAGCCCAGTGAATATATTGCCGCCATCTTGGAGCTCAGTGCCTTTGTAGAAA
AGAGAAACCAGCAGATTCTCTTGCACACGGACTTCCTGTATTATCTCACTCCTGATGGGCAGCGCTTCCG
CAGGGCCTGCCACCTGGTGCACGACTTCACAGATGCCGTCATCCAGGAGCGGCGCTGCACCCTCCCCACT
CAGGGTATTGATGATTTCCTCAAGAACAAGGCAAAGTCCAAGACTTTAGACTTCATTGATGTGCTTCTGC
TGAGCAAGGATGAAGATGGGAAGGAATTGTCTGATGAGGACATAAGAGCAGAAGCTGACACCTTCATGTT
TGAGGGCCATGACACTACAGCCAGTGGTCTCTCCTGGGTCCTATACCACCTTGCAAAGCACCCAGAATAC
CAGGAACAGTGCCGGCAAGAAGTGCAAGAGCTTCTGAAGGACCGTGAACCTATAGAGATTGAATGGGACG
ACCTGGCCCAGCTGCCCTTCCTGACCATGTGCATTAAGGAGAGCCTGCGGTTGCATCCCCCAGTCCCGGT
CATCTCCCGATGTTGCACGCAGGACTTTGTGCTCCCAGACGGCCGCGTCATCCCCAAAGGCATTGTCTGC
CTCATCAATATTATCGGGATCCATTACAACCCAACTGTGTGGCCAGACCCTGAGGTCTACGACCCCTTCC
GTTTCGACCAAGAGAACATCAAGGAGAGGTCACCTCTGGCTTTTATTCCCTTCTCGGCAGGGCCCAGAAA
CTGCATCGGGCAGGCGTTCGCCATGGCTGAGATGAAGGTGGTCCTGGCGCTCACCCTGCTGCACTTCCGC
ATCCTGCCGACCCACACTGAACCCCGCAGGAAACCCGAGCTGATATTGCGCGCAGAGGGTGGACTTTGGC
TGCGGGTGGAGCCCCTGGGTGCGAACTCACAGTGA

Translation (524 aa):
MPQLSLSWLGLGPVAASPWLLLLLVGGSWLLARVLAWTYTFYDNCRRLQCFPQPPKQNWFWGHQGLVTPT
EEGMKTLTQLVTTYPQGFKLWLGPTFPLLILCHPDIIRPITSASAAVAPKDMIFYGFLKPWLGDGLLLSG
GDKWSRHRRMLTPAFHFNILKPYMKIFNKSVNIMHDKWQRLASEGSARLDMFEHISLMTLDSLQKCVFSF
ESNCQEKPSEYIAAILELSAFVEKRNQQILLHTDFLYYLTPDGQRFRRACHLVHDFTDAVIQERRCTLPT
QGIDDFLKNKAKSKTLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEY
QEQCRQEVQELLKDREPIEIEWDDLAQLPFLTMCIKESLRLHPPVPVISRCCTQDFVLPDGRVIPKGIVC
LINIIGIHYNPTVWPDPEVYDPFRFDQENIKERSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALTLLHFR
ILPTHTEPRRKPELILRAEGGLWLRVEPLGANSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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