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Report for CCDS12188.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12188.1 Public Homo sapiens 19 EVI5L 24 110 108 CCDS HistoryNCBI Gene:115704Re-query CCDS DB by CCDS ID:12188.1Re-query CCDS DB by GeneID:115704See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12188.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270530.8 ENSP00000270530.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000270530.8Link to Ensembl Protein Viewer:ENSP00000270530.3Re-query CCDS DB by Nucleotide ID:ENST00000270530Re-query CCDS DB by Protein ID:ENSP00000270530
Original member Current member NCBI NM_145245.5 NP_660288.1 Accepted alive Link to Nucleotide Sequence:NM_145245.5Link to Protein Sequence:NP_660288.1Re-query CCDS DB by Nucleotide ID:NM_145245Re-query CCDS DB by Protein ID:NP_660288Link to BLAST:NP_660288.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660288.1 794 Q96CN4-1 794 100% 0 0

Chromosomal Locations for CCDS 12188.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7846543 7846679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7847732 7847921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7848921 7849145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7849256 7849330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7849997 7850122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7851434 7851577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7851681 7851770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7853086 7853183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7853273 7853333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7856015 7856068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7858191 7858331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7860561 7860689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7861878 7862018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7862122 7862277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7862388 7862534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7862972 7863067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7863185 7863280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7863424 7863702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2385 nt):
ATGGCGAGCCCCACTCTGAGCCCCGACTCCTCATCCCAGGAGGCCCTGTCGGCCCCCACCTGCTCCCCAA
CCTCTGACTCCGAGAACCTCAGCCCCGATGAGCTGGAGCTGCTGGCCAAGCTCGAAGAGCAGAACCGGCT
CCTGGAGGCCGACTCCAAGTCCATGCGCTCCATGAATGGCTCGCGGCGGAACAGTGGCTCCTCGCTAGTG
TCCAGCTCCTCGGCCTCCTCCAACCTGAGCCACCTGGAGGAGGACACGTGGATCCTGTGGGGCCGGATCG
CCAACGAGTGGGAGGAGTGGCGGCGCAGGAAGGAGAAGCTGCTCAAGGAGCTGATCCGCAAGGGCATCCC
CCACCACTTCCGGGCCATCGTGTGGCAGCTTCTGTGCAGCGCCACGGACATGCCCGTCAAGAACCAGTAC
TCCGAGCTGCTCAAGATGTCCTCGCCGTGCGAGAAGCTGATCCGCAGGGACATCGCCCGCACCTACCCGG
AACATGAGTTCTTCAAGGGCCAGGACAGCCTGGGCCAGGAGGTCCTCTTCAACGTCATGAAGGCATACTC
GCTGGTAGACCGGGAGGTGGGCTACTGCCAGGGAAGCGCCTTCATCGTGGGCCTGCTCCTCATGCAGATG
CCTGAGGAGGAGGCCTTCTGTGTGTTCGTGCGGCTGATGCAGGAGTACCGGCTGCGGGAGCTCTTCAAAC
CCAGCATGGCCGAGCTCGGGCTCTGCATCTATCAGTTCGAGTACATGCTGCAGGAGCAGCTCCCAGACCT
CAACACCCACTTCCGTTCCCAAAGCTTCCACACATCCATGTATGCCTCGTCCTGGTTCCTCACACTGTTC
CTGACCACCTTCCCACTCCCCGTCGCCACCCGGGTCTTTGACATCTTCATGTATGAGGGGCTGGAGATCG
TGTTCCGAGTGGGCCTCGCCCTGCTGCAGGTGAACCAGGCAGAGCTGATGCAGCTGGACATGGAGGGGAT
GTCCCAGTACTTCCAGAGAGTGATCCCCCACCAGTTCGACAGCTGCCCGGACAAGCTGGTCCTCAAAGCC
TACCAGGTCAAGTACAACCCCAAGAAGATGAAGAGGCTGGAGAAGGAGTACGCAGCCATGAAGAGCAAGG
AGATGGAGGAGCAGATCGAGATCAAAAGACTTCGGACGGAGAACCGGCTCCTGAAACAGCGGATTGAAAC
CCTAGAGAAGGGGCAAGTGACACGGGCGCAGGAGGCGGAGGAGAACTACGTCATCAAGCGGGAGCTGGCG
GTGGTGCGGCAGCAGTGCAGCTCGGCGGCCGAGGACCTGCAGAAGGCACAGAGCACCATCCGGCAGCTAC
AGGAGCAGCAGGAGAACCCCCGCCTCACAGAAGACTTCGTGTCCCACCTGGAGACCGAGCTGGAGCAGTC
GAGGCTGCGGGAGACGGAGACACTGGGGGCCCTTCGGGAGATGCAGGACAAGGTTCTCGACATGGAAAAG
AGGAACAGCTCGCTGCCCGACGAGAACAATGTGGCGCAGCTGCAGGAGGAGCTGAAGGCGCTCAAGGTGC
GGGAAGGCCAGGCGGTGGCCTCGACGCGAGAGCTTAAACTGCAGCTGCAGGAGCTCTCGGACACCTGGCA
GGCCCATCTGGCCCGCGGCGGCCGCTGGAAGGAGTCCCCACGGAAGCTGGTCGTGGGCGAGCTGCAGGAC
GAGCTGATGAGCGTGCGTCTGCGCGAGGCCCAGGCCCTGGCCGAGGGCCGCGAGCTGCGGCAGCGCGTGG
TGGAACTTGAGACGCAGGACCACATCCACCGCAACCTTCTGAACCGCGTGGAGGCGGAGCGCGCGGCGCT
GCAGGAGAAGCTGCAGTACCTGGCTGCACAGAACAAGGGGCTGCAGACGCAGCTCAGCGAAAGCCGCCGC
AAGCAGGCCGAGGCCGAGTGCAAGAGCAAGGAGGAGGTGATGGCTGTGCGACTGCGGGAGGCGGACAGCA
TGGCTGCGGTGGCCGAGATGCGGCAGCGCATTGCCGAGCTGGAGATCCAGAGGGAGGAAGGCCGCATCCA
GGGCCAGCTGAACCACTCGGACTCATCGCAGTACATCCGCGAGCTCAAGGACCAGATCGAGGAGCTGAAG
GCCGAGGTGCGGCTGCTGAAGGGCCCGCCGCCCTTCGAGGACCCGCTGGCTTTCGATGGGCTGAGCCTGG
CGCGGCACTTGGACGAGGACTCGCTGCCGTCGTCGGACGAGGAGCTACTTGGCGTAGGCGTGGGCGCTGC
CCTGCAGGACGCATTGTACCCTCTGTCCCCGCGCGATGCGCGCTTCTTCCGCCGTCTGGAGCGGCCGGCC
AAGGACAGCGAGGGCAGCTCAGACAGCGACGCCGATGAGCTGGCCGCGCCCTACAGCCAGGGTCTGGACA
ACTGA

Translation (794 aa):
MASPTLSPDSSSQEALSAPTCSPTSDSENLSPDELELLAKLEEQNRLLEADSKSMRSMNGSRRNSGSSLV
SSSSASSNLSHLEEDTWILWGRIANEWEEWRRRKEKLLKELIRKGIPHHFRAIVWQLLCSATDMPVKNQY
SELLKMSSPCEKLIRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLLLMQM
PEEEAFCVFVRLMQEYRLRELFKPSMAELGLCIYQFEYMLQEQLPDLNTHFRSQSFHTSMYASSWFLTLF
LTTFPLPVATRVFDIFMYEGLEIVFRVGLALLQVNQAELMQLDMEGMSQYFQRVIPHQFDSCPDKLVLKA
YQVKYNPKKMKRLEKEYAAMKSKEMEEQIEIKRLRTENRLLKQRIETLEKGQVTRAQEAEENYVIKRELA
VVRQQCSSAAEDLQKAQSTIRQLQEQQENPRLTEDFVSHLETELEQSRLRETETLGALREMQDKVLDMEK
RNSSLPDENNVAQLQEELKALKVREGQAVASTRELKLQLQELSDTWQAHLARGGRWKESPRKLVVGELQD
ELMSVRLREAQALAEGRELRQRVVELETQDHIHRNLLNRVEAERAALQEKLQYLAAQNKGLQTQLSESRR
KQAEAECKSKEEVMAVRLREADSMAAVAEMRQRIAELEIQREEGRIQGQLNHSDSSQYIRELKDQIEELK
AEVRLLKGPPPFEDPLAFDGLSLARHLDEDSLPSSDEELLGVGVGAALQDALYPLSPRDARFFRRLERPA
KDSEGSSDSDADELAAPYSQGLDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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