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Report for CCDS12077.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12077.1 Public Homo sapiens 19 CSNK1G2 24 110 108 CCDS HistoryNCBI Gene:1455Re-query CCDS DB by CCDS ID:12077.1Re-query CCDS DB by GeneID:1455See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12077.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255641.13 ENSP00000255641.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000255641.13Link to Ensembl Protein Viewer:ENSP00000255641.7Re-query CCDS DB by Nucleotide ID:ENST00000255641Re-query CCDS DB by Protein ID:ENSP00000255641
Original member Current member NCBI NM_001319.7 NP_001310.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001319.7Link to Protein Sequence:NP_001310.3Re-query CCDS DB by Nucleotide ID:NM_001319Re-query CCDS DB by Protein ID:NP_001310Link to BLAST:NP_001310.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001310.3 415 P78368 415 100% 0 0

Chromosomal Locations for CCDS 12077.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1969773 1969959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1978305 1978345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1978442 1978511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1978602 1978750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1978859 1979093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1979163 1979248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1979319 1979403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1979495 1979643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1979752 1979835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1979911 1980017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1980149 1980203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGGATTTTGACAAGAAAGGAGGGAAAGGGGAGACGGAGGAGGGCCGGAGAATGTCCAAGGCCGGCGGGG
GCCGGAGCAGCCACGGCATCCGGAGCTCGGGGACCAGCTCGGGGGTCCTGATGGTGGGCCCCAACTTCCG
CGTCGGCAAGAAGATCGGCTGCGGCAACTTCGGGGAGCTCCGCCTAGGAAAGAATCTCTATACAAATGAA
TACGTGGCTATCAAATTGGAGCCGATCAAGTCCCGGGCCCCGCAGCTGCACCTGGAGTACCGGTTCTACA
AGCAGCTCAGCGCCACAGAGGGCGTCCCTCAGGTCTACTACTTCGGTCCGTGCGGGAAGTACAACGCCAT
GGTGCTGGAGCTGCTGGGGCCCAGCCTGGAGGACCTGTTCGACCTGTGCGACCGGACCTTCACGCTCAAG
ACGGTGCTGATGATCGCCATCCAGCTGATCACGCGCATGGAGTATGTGCACACCAAGAGCCTAATCTACC
GGGACGTGAAGCCCGAGAACTTCCTGGTGGGCCGCCCGGGGACCAAGCGGCAGCATGCCATCCACATCAT
CGACTTCGGGCTGGCCAAGGAGTACATCGACCCCGAGACCAAGAAGCACATCCCGTACCGCGAGCACAAG
AGCCTGACGGGCACGGCGCGCTACATGAGCATCAACACGCACCTGGGCAAGGAGCAGAGCCGCCGCGACG
ACCTGGAGGCGCTGGGCCACATGTTCATGTACTTCCTGCGCGGCAGCCTCCCCTGGCAGGGGCTCAAGGC
CGACACGCTCAAGGAGCGGTACCAGAAGATCGGGGACACCAAACGCGCCACGCCCATCGAGGTGCTCTGC
GAGAACTTCCCAGAGGAGATGGCCACGTACCTGCGCTATGTGCGGCGCCTGGACTTCTTCGAGAAGCCCG
ACTATGACTACCTGCGGAAGCTCTTCACCGACCTCTTCGACCGCAGTGGCTTCGTGTTCGACTATGAGTA
CGACTGGGCCGGGAAGCCCCTGCCGACCCCCATCGGCACCGTCCACACCGACCTGCCCTCCCAGCCTCAG
CTCCGGGACAAAACCCAGCCGCACAGCAAAAACCAGGCGTTGAACTCCACCAACGGGGAGCTGAATGCGG
ACGACCCCACGGCCGGCCACTCCAACGCCCCGATCACAGCGCCTGCAGAGGTGGAGGTGGCCGATGAAAC
CAAATGCTGCTGTTTCTTCAAGAGGAGAAAGAGAAAATCGCTGCAGCGACACAAGTGA

Translation (415 aa):
MDFDKKGGKGETEEGRRMSKAGGGRSSHGIRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNE
YVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLK
TVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHK
SLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLC
ENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDWAGKPLPTPIGTVHTDLPSQPQ
LRDKTQPHSKNQALNSTNGELNADDPTAGHSNAPITAPAEVEVADETKCCCFFKRRKRKSLQRHK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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