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Report for CCDS12071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12071.1 Public Homo sapiens 19 ADAMTSL5 24 110 108 CCDS HistoryNCBI Gene:339366Re-query CCDS DB by CCDS ID:12071.1Re-query CCDS DB by GeneID:339366See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12071.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330475.9 ENSP00000327608.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330475.9Link to Ensembl Protein Viewer:ENSP00000327608.3Re-query CCDS DB by Nucleotide ID:ENST00000330475Re-query CCDS DB by Protein ID:ENSP00000327608
Original member Current member NCBI NM_213604.3 NP_998769.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_213604.3Link to Protein Sequence:NP_998769.2Re-query CCDS DB by Nucleotide ID:NM_213604Re-query CCDS DB by Protein ID:NP_998769Link to BLAST:NP_998769.2

Chromosomal Locations for CCDS 12071.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1506015 1506316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1506590 1506661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1506739 1506928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1507242 1507405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1507557 1507643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1507998 1508109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1508443 1508570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1510150 1510258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1510368 1510428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1510639 1510730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1510845 1510943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1416 nt):
ATGGACTCGGCCCCTCTGTTCCCCAGGCCCCACCTCTTCCAGAACCTCCTGCTCTTCCTGTGGGCCCTGC
TGAACTGTGGTTTGGGGGTCAGTGCTCAGGGTCCGGGCGAGTGGACCCCGTGGGTGTCCTGGACCCGCTG
CTCCAGCTCCTGCGGGCGTGGCGTCTCTGTGCGCAGCCGGCGCTGCCTCCGGCTTCCTGGGGAAGAACCG
TGCTGGGGAGACTCCCATGAGTACCGCCTCTGCCAGTTGCCAGACTGCCCCCCAGGGGCTGTGCCCTTCC
GAGACCTACAGTGTGCCCTGTACAATGGCCGCCCTGTCCTGGGCACCCAGAAGACCTACCAGTGGGTGCC
CTTCCATGGGGCGCCCAACCAGTGCGACCTCAACTGCCTGGCTGAGGGGCACGCCTTCTACCACAGCTTC
GGCCGCGTCCTGGACGGCACCGCCTGCAGCCCGGGTGCCCAGGGGGTCTGCGTGGCTGGCCGCTGCCTTA
GCGCCGGCTGTGATGGGTTGTTGGGCTCGGGTGCCCTCGAGGACCGCTGTGGCCGCTGCGGAGGCGCCAA
CGACTCGTGCCTTTTCGTGCAGCGCGTGTTTCGTGACGCCGGTGCCTTCGCTGGGTACTGGAACGTGACC
CTGATCCCCGAGGGCGCCAGACACATCCGCGTGGAACACAGGAGCCGCAACCACCTGGCACTGATGGGGG
GCGATGGGCGCTACGTGCTTAATGGGCACTGGGTGGTCAGCCCACCAGGGACCTACGAGGCGGCCGGCAC
GCATGTGGTCTACACCCGAGACACAGGGCCCCAGGAGACATTGCAAGCAGCCGGGCCCACCTCCCATGAC
CTGCTCCTACAGGTCCTCCTGCAGGAGCCCAACCCTGGCATCGAGTTTGAGTTCTGGCTCCCTCGGGAGC
GCTACAGCCCCTTCCAGGCTCGTGTGCAGGCCCTGGGCTGGCCCCTGAGGCAGCCTCAGCCCCGGGGGGT
GGAGCCTCAGCCCCCCGCAGCCCCTGCTGTCACCCCTGCACAGACCCCAACGCTGGCCCCAGACCCCTGC
CCACCCTGCCCTGACACCCGCGGCCGCGCCCACCGACTACTCCACTATTGCGGCAGTGACTTTGTGTTCC
AGGCCCGAGTGCTGGGCCACCACCACCAGGCCCAGGAGACCCGCTATGAGGTGCGCATCCAGCTCGTCTA
CAAGAACCGCTCGCCACTGCGGGCACGCGAGTACGTGTGGGCGCCAGGCCACTGCCCCTGCCCGATGCTG
GCACCCCACCGGGACTACCTGATGGCTGTCCAGCGTCTTGTCAGCCCCGACGGCACACAGGACCAGCTGC
TGCTGCCCCACGCCGGCTACGCCCGGCCCTGGAGCCCTGCGGAGGACAGCCGCATACGCCTGACTGCCCG
GCGCTGTCCTGGCTGA

Translation (471 aa):
MDSAPLFPRPHLFQNLLLFLWALLNCGLGVSAQGPGEWTPWVSWTRCSSSCGRGVSVRSRRCLRLPGEEP
CWGDSHEYRLCQLPDCPPGAVPFRDLQCALYNGRPVLGTQKTYQWVPFHGAPNQCDLNCLAEGHAFYHSF
GRVLDGTACSPGAQGVCVAGRCLSAGCDGLLGSGALEDRCGRCGGANDSCLFVQRVFRDAGAFAGYWNVT
LIPEGARHIRVEHRSRNHLALMGGDGRYVLNGHWVVSPPGTYEAAGTHVVYTRDTGPQETLQAAGPTSHD
LLLQVLLQEPNPGIEFEFWLPRERYSPFQARVQALGWPLRQPQPRGVEPQPPAAPAVTPAQTPTLAPDPC
PPCPDTRGRAHRLLHYCGSDFVFQARVLGHHHQAQETRYEVRIQLVYKNRSPLRAREYVWAPGHCPCPML
APHRDYLMAVQRLVSPDGTQDQLLLPHAGYARPWSPAEDSRIRLTARRCPG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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