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Report for CCDS12042.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12042.1 Public Homo sapiens 19 MISP 24 110 108 CCDS HistoryNCBI Gene:126353Re-query CCDS DB by CCDS ID:12042.1Re-query CCDS DB by GeneID:126353See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12042.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000215582.8 ENSP00000215582.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000215582.8Link to Ensembl Protein Viewer:ENSP00000215582.4Re-query CCDS DB by Nucleotide ID:ENST00000215582Re-query CCDS DB by Protein ID:ENSP00000215582
Original member Current member NCBI NM_173481.4 NP_775752.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173481.4Link to Protein Sequence:NP_775752.1Re-query CCDS DB by Nucleotide ID:NM_173481Re-query CCDS DB by Protein ID:NP_775752Link to BLAST:NP_775752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775752.1 679 Q8IVT2 679 100% 0 0

Chromosomal Locations for CCDS 12042.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 756947 758726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 759909 760039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 761625 761663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 763501 763590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2040 nt):
ATGGACCGCGTGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCCTGGTGCTGG
ATGGAGACACCAGCTACACATACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCAGGATGA
GCCGCAGACATGGCCCACTGACCACAGGGCCCAGCAGGGCGTGCAGAGGCAGGGGGTGTCCTACAGCGTG
CATGCCTACACTGGCCAGCCGTCCCCACGGGGGCTCCACTCGGAGAACAGGGAGGATGAGGGTTGGCAGG
TTTACCGCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGA
GGACAAGGAGATGAAGACCTACCGCCTGGATGCTGGGGACGCTGACCCCAGGAGGCTGTGTGACCTGGAG
CGGGAGCGCTGGGCCGTCATCCAGGGCCAGGCAGTCAGGAAGAGCAGCACCGTGGCCACGCTCCAGGGCA
CTCCTGACCACGGAGACCCCAGGACCCCCGGCCCACCTCGGTCCACGCCCCTGGAGGAGAACGTGGTTGA
CAGGGAGCAGATTGACTTCCTGGCAGCGAGACAGCAGTTCCTGAGTCTGGAGCAGGCGAACAAGGGGGCC
CCTCATAGCTCCCCGGCCAGGGGGACCCCTGCAGGCACAACCCCAGGGGCCAGCCAGGCCCCCAAGGCCT
TCAACAAGCCCCACCTGGCCAACGGGCACGTGGTTCCCATCAAGCCCCAGGTGAAGGGGGTGGTCAGGGA
AGAGAACAAGGTGCGTGCTGTGCCCACCTGGGCCAGTGTCCAAGTTGTGGATGACCCTGGCTCCTTGGCC
TCAGTGGAGTCCCCGGGGACCCCCAAGGAGACGCCCATCGAGCGGGAGATCCGTCTGGCTCAGGAGCGTG
AGGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCAC
CAGGCCGCTGCTGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGGGCGCCCGTCCCTCTAC
GTGCAGCGGGACATAGTACAGGAGACACAGCGTGAGGAAGACCACCGGCGGGAGGGCCTGCACGTGGGCC
GGGCGTCCACACCCGACTGGGTCTCGGAGGGTCCCCAGCCCGGACTCCGGAGAGCCCTCAGCTCAGATTC
CATCCTCAGCCCGGCCCCAGATGCCCGTGCGGCCGACCCAGCTCCAGAAGTGAGGAAGGTGAACCGCATC
CCACCTGATGCCTACCAGCCGTACCTGAGCCCCGGGACCCCCCAGCTAGAATTCTCAGCCTTCGGAGCAT
TCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCCC
GAGGCATCTCTCAGAATCCTCTGGAAAACCCCTGAGCACAAAGCAAGAGGCATCGAAGCCCCCTCGGGGA
TGCCCGCAAGCCAACAGGGGTGTCGTGCGGTGGGAGTACTTCCGCCTGCGTCCTCTGCGGTTCAGGGCCC
CAGACGAGCCCCAGCAGGCCCAAGTCCCCCATGTCTGGGGCTGGGAGGTGGCTGGGGCCCCTGCACTGAG
GCTGCAGAAGTCCCAGTCATCTGATCTGCTGGAAAGGGAGAGGGAGAGTGTCCTGCGCCGGGAGCAAGAG
GTGGCAGAGGAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACC
AGAACTCCAGGAGCTCCTCCCAGGCATCCGGCATCACGGGCAGTTACTCGGTGTCTGAGTCTCCCTTCTT
CAGCCCCATCCACCTACACTCAAACGTGGCGTGGACAGTGGAAGATCCAGTGGACAGTGCTCCTCCCGGG
CAGAGAAAGAAGGAGCAATGGTACGCTGGCATCAACCCCTCGGACGGTATCAACTCAGAGGTCCTGGAAG
CCATACGGGTGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGA
GGATGACTGA

Translation (679 aa):
MDRVTRYPILGIPQAHRGTGLVLDGDTSYTYHLVCMGPEASGWGQDEPQTWPTDHRAQQGVQRQGVSYSV
HAYTGQPSPRGLHSENREDEGWQVYRLGARDAHQGRPTWALRPEDGEDKEMKTYRLDAGDADPRRLCDLE
RERWAVIQGQAVRKSSTVATLQGTPDHGDPRTPGPPRSTPLEENVVDREQIDFLAARQQFLSLEQANKGA
PHSSPARGTPAGTTPGASQAPKAFNKPHLANGHVVPIKPQVKGVVREENKVRAVPTWASVQVVDDPGSLA
SVESPGTPKETPIEREIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLY
VQRDIVQETQREEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRI
PPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRG
CPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPALRLQKSQSSDLLERERESVLRREQE
VAEERRNALFPEVFSPTPDENSDQNSRSSSQASGITGSYSVSESPFFSPIHLHSNVAWTVEDPVDSAPPG
QRKKEQWYAGINPSDGINSEVLEAIRVTRHKNAMAERWESRIYASEEDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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