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Report for CCDS11962.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11962.1 Public Homo sapiens 18 WDR7 24 110 108 CCDS HistoryNCBI Gene:23335Re-query CCDS DB by CCDS ID:11962.1Re-query CCDS DB by GeneID:23335See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11962.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254442.8 ENSP00000254442.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254442.8Link to Ensembl Protein Viewer:ENSP00000254442.3Re-query CCDS DB by Nucleotide ID:ENST00000254442Re-query CCDS DB by Protein ID:ENSP00000254442
Original member Current member NCBI NM_001382487.1 NP_001369416.1 Accepted alive Link to Nucleotide Sequence:NM_001382487.1Link to Protein Sequence:NP_001369416.1Re-query CCDS DB by Nucleotide ID:NM_001382487Re-query CCDS DB by Protein ID:NP_001369416Link to BLAST:NP_001369416.1
Original member Current member NCBI NM_015285.3 NP_056100.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015285.3Link to Protein Sequence:NP_056100.2Re-query CCDS DB by Nucleotide ID:NM_015285Re-query CCDS DB by Protein ID:NP_056100Link to BLAST:NP_056100.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001369416.1 1490 Q9Y4E6-1 1490 100% 0 0
NP_056100.2 1490 Q9Y4E6-1 1490 100% 0 0

Chromosomal Locations for CCDS 11962.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 56672516 56672674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56679332 56679438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56681313 56681391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56682679 56682853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56685956 56686032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56686855 56686974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56691216 56691361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56691715 56691817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56694619 56694760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56694950 56695198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56696242 56696462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56717964 56718159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56731383 56731597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56756583 56757352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56758865 56758953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56776782 56776880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56779431 56779549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56781533 56781656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56816031 56816144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56879944 56880165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56923922 56924108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56935788 56935905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56938533 56938682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56939311 56939393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 56962430 56962529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 57020745 57020849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 57027004 57027207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4473 nt):
ATGGCAGGAAACAGCCTTGTTCTACCCATTGTTCTTTGGGGTCGAAAAGCGCCCACACATTGCATCTCAG
CCGTACTTTTAACAGATGATGGGGCCACGATCGTAACAGGATGTCACGACGGACAAATATGTCTCTGGGA
TCTTTCAGTAGAACTGCAAATTAATCCTCGAGCACTGTTGTTTGGTCATACAGCATCAATCACTTGTTTG
TCTAAAGCTTGTGCTTCCAGTGACAAACAGTATATTGTGAGTGCATCTGAAAGTGGAGAGATGTGCCTCT
GGGATGTGAGTGATGGCAGATGTATTGAATTTACAAAATTAGCTTGCACACATACTGGCATACAGTTCTA
CCAGTTCTCTGTTGGGAATCAGCGAGAAGGAAGGCTTTTATGCCACGGACATTACCCTGAAATCCTTGTT
GTGGATGCTACCAGCCTTGAAGTATTATACTCCTTAGTATCAAAGATATCACCAGACTGGATTAGCTCCA
TGAGTATTATTCGATCCCACCGAACACAAGAGGACACAGTGGTAGCACTCTCGGTGACTGGCATCCTGAA
GGTCTGGATTGTTACCTCGGAAATAAGTGACATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAA
CCAATTTATTGTCAGAATTGCCAAAGCATCTCTTTTTGTGCATTTACACAAAGGTCACTTTTGGTTGTGT
GTTCCAAATATTGGAGGGTGTTCGATGCCGGAGACTATTCCTTGTTGTGTTCAGGTCCTAGTGAAAATGG
ACAGACATGGACCGGGGGGGACTTTGTCTCATCAGATAAAGTCATCATTTGGACAGAAAATGGGCAAAGT
TATATTTACAAACTACCTGCCAGTTGCCTTCCAGCTAGTGATTCATTCCGCAGTGATGTGGGGAAGGCAG
TTGAAAATTTAATTCCTCCTGTACAACATATCCTCTTGGATCGAAAAGATAAAGAGTTGCTAATTTGTCC
TCCTGTTACTCGGTTCTTCTATGGATGCAGAGAATATTTCCATAAACTGTTAATTCAGGGTGATTCTTCT
GGAAGGTTGAATATTTGGAACATATCAGACACAGCTGATAAACAGGGAAGTGAAGAAGGGCTGGCAATGA
CAACTTCTATTAGTTTGCAAGAGGCATTTGATAAACTGAATCCTTGTCCTGCTGGAATTATAGATCAGCT
GAGTGTGATTCCCAATAGTAATGAACCTCTTAAAGTAACTGCAAGTGTGTACATACCAGCACATGGACGA
CTTGTTTGTGGTCGTGAAGATGGAAGCATAGTTATTGTACCTGCCACACAGACGGCCATAGTACAGCTGT
TGCAAGGGGAACACATGCTCAGAAGAGGTTGGCCACCTCACAGAACACTCCGTGGTCATCGGAACAAAGT
CACATGTTTGCTATATCCTCATCAGGTCTCAGCTCGGTATGATCAAAGATACCTGATATCTGGAGGTGTG
GATTTTTCAGTCATAATTTGGGACATATTTTCTGGAGAAATGAAACATATCTTCTGTGTTCATGGTGGTG
AGATTACTCAACTTCTAGTTCCACCTGAAAACTGTAGTGCAAGAGTACAGCACTGCATCTGCTCTGTAGC
CAGTGACCACTCAGTAGGACTTCTAAGTTTGCGAGAGAAAAAATGCATAATGTTGGCATCTCGTCACCTT
TTTCCTATTCAAGTAATCAAATGGAGGCCTTCTGATGATTACCTGGTGGTGGGGTGTTCAGATGGTTCTG
TGTACGTCTGGCAAATGGATACTGGTGCATTGGATCGTTGTGTGATGGGGATAACAGCAGTTGAGATTCT
AAACGCTTGTGATGAAGCTGTTCCTGCTGCTGTTGATTCACTTAGTCATCCAGCAGTCAACCTAAAACAA
GCTATGACGAGACGTAGTCTTGCTGCTCTTAAAAATATGGCCCATCATAAGCTACAAACCCTTGCAACTA
ACCTCTTGGCTTCTGAGGCATCTGACAAGGGAAATTTACCTAAATATTCTCATAACTCCCTGATGGTTCA
AGCAATAAAGACAAACCTAACAGACCCGGACATACATGTGCTATTCTTTGATGTGGAAGCGTTGATTATT
CAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGCTCTTATTTCCCCAGAGAATTTGCAAAAAGCAT
CTGGCAGTTCAGACAAAGGGGGCTCTTTTTTAACTGGAAAACGAGCAGCAGTTCTCTTCCAACAAGTGAA
AGAAACGATCAAAGAGAACATCAAGGAACACCTCCTTGATGATGAAGAGGAGGATGAGGAGATAATGAGG
CAGAGAAGGGAAGAAAGTGATCCTGAATATCGGTCCAGCAAATCAAAGCCATTGACCCTATTAGAATATA
ATTTAACTATGGACACTGCAAAGCTGTTTATGTCCTGCCTTCACGCCTGGGGTTTGAATGAAGTACTGGA
TGAAGTTTGCCTGGATCGCCTTGGAATGCTGAAACCCCACTGCACCGTATCGTTTGGCCTCTTGTCAAGA
GGAGGCCATATGTCACTGATGCTGCCGGGTTATAATCAGCCTGCTTGTAAACTGTCACATGGGAAAACAG
AAGTAGGAAGGAAGCTGCCAGCGTCTGAGGGAGTAGGAAAGGGAACTTACGGAGTGTCCCGTGCCGTCAC
CACACAGCATCTCCTGTCTATCATTTCTTTGGCAAATACTTTAATGAGTATGACCAATGCAACTTTTATT
GGTGATCATATGAAGAAGGGTCCTACCAGGCCACCTAGACCAAGCACCCCAGACCTTTCTAAGGCAAGGG
GTTCCCCTCCAACTTCCAGTAATATTGTGCAAGGACAGATTAAACAAGTTGCTGCACCTGTCGTTTCCGC
TCGGTCTGATGCTGATCACTCTGGCTCTGACCCTCCTTCTGCTCCTGCTTTACATACCTGTTTCTTAGTA
AATGAAGGTTGGAGTCAGTTAGCTGCTATGCACTGTGTTATGCTGCCAGACCTACTGGGATTGGATAAAT
TTAGGCCTCCCCTTCTGGAGATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGAGGTGAGAGAAGCCGC
GCAGGCCCTGCTTCTGGCGGAACTGAGAAGAATTGAGCAGGCAGGCAGGAAGGAAGCCATTGATGCCTGG
GCTCCTTACTTACCTCAGTACATAGACCACGTCATATCACCTGGAGTCACATCAGAAGCCGCGCAGACTA
TCACCACGGCTCCTGATGCCTCAGGGCCTGAAGCAAAAGTCCAGGAGGAAGAGCATGACCTTGTTGACGA
TGACATCACCACTGGTTGCTTATCAAGTGTCCCACAAATGAAAAAAATTTCTACATCTTACGAGGAAAGA
CGGAAGCAAGCTACCGCTATTGTTTTACTTGGAGTAATAGGAGCTGAATTTGGTGCTGAAATTGAACCTC
CTAAACTATTGACCAGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATTCGGGTTGACTAGTGGTGGATC
CAACTACTCGCTGGCCAGACATACTTGCAAGGCACTGACGTTTCTTCTGCTACAGCCTCCAAGCCCCAAA
CTTCCTCCACACAGCACTATCCGAAGAACAGCCATTGATCTGATTGGACGTGGGTTCACTGTTTGGGAGC
CTTACATGGATGTGTCCGCTGTTCTGATGGGGCTTCTCGAACTTTGTGCCGATGCCGAGAAACAACTTGC
CAACATCACAATGGGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCCCGCTCTGCGAGGCATGCCCTCTCG
CTCATTGCCACCGCCAGACCACCCGCCTTCATCACCACCATAGCCAAAGAGGTACACAGACATACGGCTC
TTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCTAAAGGGGAAATTTT
GAGAGTCATTGAAATTCTTATTGAAAAGATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGAC
ATCATTATGTACTGCCTTGAAGGATCTTTAGTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGCCATCT
GCAGGTTCTACATGGTCAGCTATTATGAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCATGGTTCAGT
GGCCCTGTACGACATCCGGACTGGAAAATGTCAGACAATCCATGGACACAAGGGACCAATCACTGCAGTG
GCTTTTGCTCCTGATGGAAGATATCTTGCCACCTACTCAAACACTGACAGCCACATTTCTTTTTGGCAGA
TGAACACGTCACTGCTGGGAAGCATCGGCATGCTGAACTCGGCACCTCAGCTGCGCTGCATTAAAACCTA
CCAGGTGCCCCCTGTGCAGCCCGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCATCTGG
ACTTCCAACCGCAACGTCATCCTCATGGCCCATGACGGGAAGGAGCACCGCTTCATGGTCTAA

Translation (1490 aa):
MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELQINPRALLFGHTASITCL
SKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFSVGNQREGRLLCHGHYPEILV
VDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVALSVTGILKVWIVTSEISDMQDTEPIFEEESK
PIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSSDKVIIWTENGQS
YIYKLPASCLPASDSFRSDVGKAVENLIPPVQHILLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSS
GRLNIWNISDTADKQGSEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGV
DFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHL
FPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDSLSHPAVNLKQ
AMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALII
QLLTEEASRPNTALISPENLQKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMR
QRREESDPEYRSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQPACKLSHGKTEVGRKLPASEGVGKGTYGVSRAVTTQHLLSIISLANTLMSMTNATFI
GDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSDADHSGSDPPSAPALHTCFLV
NEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAW
APYLPQYIDHVISPGVTSEAAQTITTAPDASGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEER
RKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPK
LPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
LIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMD
IIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAV
AFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIW
TSNRNVILMAHDGKEHRFMV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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