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Report for CCDS11797.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11797.1 Public Homo sapiens 17 LRRC45 24 110 108 CCDS HistoryNCBI Gene:201255Re-query CCDS DB by CCDS ID:11797.1Re-query CCDS DB by GeneID:201255See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11797.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306688.8 ENSP00000306760.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000306688.8Link to Ensembl Protein Viewer:ENSP00000306760.3Re-query CCDS DB by Nucleotide ID:ENST00000306688Re-query CCDS DB by Protein ID:ENSP00000306760
Original member Current member NCBI NM_144999.4 NP_659436.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144999.4Link to Protein Sequence:NP_659436.1Re-query CCDS DB by Nucleotide ID:NM_144999Re-query CCDS DB by Protein ID:NP_659436Link to BLAST:NP_659436.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659436.1 670 Q96CN5 670 100% 0 0

Chromosomal Locations for CCDS 11797.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 82023644 82023863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82024278 82024339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82024693 82024763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82025000 82025178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82025379 82025507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82026899 82027011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82027386 82027444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82027674 82027751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82028011 82028146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82028234 82028311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82028397 82028508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82028613 82028683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82029093 82029185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82029543 82029635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82030065 82030238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82030319 82030466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82030609 82030805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2013 nt):
ATGGAGGAGTTCCGGCGCTCCTACAGCCGCCTGTGCAGGGAGAGTGGGGCCGAGCCCCAGGAGGCTGTCC
TGCAGCAGCTGCACCAGCTTCCCAGGGGCCGGCTGGACCTGGCCACGCAAAGCCTGACGGTGGAGACCTG
CAGGGCCCTGGGCAAGCTGCTGCCGAGGGAGACGCTGTGCACGGAGCTGGTCCTGAGTGACTGCATGCTC
AGCGAGGAAGGGGCCACACTGCTGCTCCGAGGCCTGTGTGCCAACACCGTGCTGCGCTTTCTGGACTTAA
AGGGCAACAACCTTCGGGCTGCAGGGGCCGAGGCTCTGGGAAAACTCCTCCAACAGAACAAGTCCATTCA
GAGCCTCACGCTGGAGTGGAACAGCCTGGGCACGTGGGACGATGCCTTCGCCACCTTCTGCGGGGGCCTG
GCGGCCAACGGCGCCCTGCAGCGGCTGGACCTCCGCAACAACCAGATCAGTCACAAGGGCGCGGAGGAGC
TGGCCCTAGCCCTGAAGGGCAACACCACCCTCCAGCAGCTGGACCTGCGCTGGAATAACGTTGGCCTCCT
GGGGGGCCGGGCCCTCATGAACTGTCTCCCCAGCAACAGAACCCTGTGGAGACTGGACCTGGCTGGGAAC
AACATCCCTGGAGACGTCCTCAGAGCCGTGGAGCAAGCCATGGGCCACAGCCAGGACCGGCTCACCACCT
TCCAGGAGAACCAAGCCCGCACTCACGTCCTCAGCAAGGAGGTCCAGCACCTCCGGGAGGAGAAGTCCAA
GCAGTTCCTCGACTTGATGGAGACTATTGATAAGCAGCGAGAAGAGATGGCCAAGAGCAGCAGGGCGTCG
GCAGCCCGTGTAGGGCAGCTTCAGGAAGCCCTGAATGAGAGGCACTCCATCATCAACGCTCTCAAGGCCA
AGCTGCAGATGACAGAGGCCGCCCTGGCTCTGTCGGAGCAGAAGGCCCAGGACCTGGGGGAGCTCCTGGC
CACAGCGGAGCAGGAGCAGCTGAGCCTGTCACAGAGGCAGGCCAAGGAGCTCAAGCTGGAGCAGCAGGAA
GCTGCAGAGCGGGAGTCTAAACTCCTCAGAGACTTGTCTGCTGCCAATGAAAAGAACCTGCTTCTGCAAA
ACCAGGTAGACGAGTTGGAGCGGAAGTTCAGGTGTCAGCAGGAGCAGCTGTTCCAGACCAGGCAGGAGAT
GACCAGCATGTCAGCTGAGCTGAAGATGCGGGCCATCCAGGCCGAGGAGCGCCTGGACATGGAGAAGAGA
AGATGCAGACAGAGCCTGGAGGACTCCGAAAGCCTGCGCATCAAGGAGGTGGAGCATATGACCCGTCACC
TGGAGGAGAGTGAGAAGGCCATGCAGGAGCGGGTGCAGAGGCTGGAGGCGGCGCGGCTGTCCCTGGAGGA
GGAGCTGAGCCGAGTGAAAGCAGCGGCACTCAGCGAGCGTGGCCAGGCTGAGGAGGAGCTGATCAAGGCC
AAGAGCCAGGCCCGCCTGGAGGAGCAACAGCGCCTGGCTCACCTGGAGGACAAGCTGAGACTGCTGGCGC
AGGCACGGGACGAGGCGCAGGGCGCTTGCCTACAGCAGAAGCAGGTGGTGGCCGAGGCCCAGACCCGGGT
CAGCCAGCTGGGCCTGCAAGTTGAGGGCCTGCGGCGGCGCCTGGAAGAGCTGCAGCAGGAGCTGAGCCTC
AAGGACCAGGAAAGGGTGGCCGAGGTGAGCAGGGTGCGCGTGGAGCTGCAGGAGCAGAACGGCCGGCTGC
AGGCGGAGCTGGCGGCTCAGGAGGCGCTGAGGGAGAAGGCGGCGGCCCTGGAGCGCCAGCTGAAAGTGAT
GGCGAGCGACCACCGAGAGGCGCTGCTGGACAGGGAGAGCGAGAACGCGTCTCTCCGGGAGAAGCTGCGG
CTCCGGGAGGCGGAGATCGCCCGCATCCGGGACGAGGAGGCCCAGAGGGCGAGCTTCCTGCAGAACGCCG
TCCTGGCTTACGTGCAGGCGTCCCCCGTGAGGACCCTGAGCCCCCCAAAGTGA

Translation (670 aa):
MEEFRRSYSRLCRESGAEPQEAVLQQLHQLPRGRLDLATQSLTVETCRALGKLLPRETLCTELVLSDCML
SEEGATLLLRGLCANTVLRFLDLKGNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTWDDAFATFCGGL
AANGALQRLDLRNNQISHKGAEELALALKGNTTLQQLDLRWNNVGLLGGRALMNCLPSNRTLWRLDLAGN
NIPGDVLRAVEQAMGHSQDRLTTFQENQARTHVLSKEVQHLREEKSKQFLDLMETIDKQREEMAKSSRAS
AARVGQLQEALNERHSIINALKAKLQMTEAALALSEQKAQDLGELLATAEQEQLSLSQRQAKELKLEQQE
AAERESKLLRDLSAANEKNLLLQNQVDELERKFRCQQEQLFQTRQEMTSMSAELKMRAIQAEERLDMEKR
RCRQSLEDSESLRIKEVEHMTRHLEESEKAMQERVQRLEAARLSLEEELSRVKAAALSERGQAEEELIKA
KSQARLEEQQRLAHLEDKLRLLAQARDEAQGACLQQKQVVAEAQTRVSQLGLQVEGLRRRLEELQQELSL
KDQERVAEVSRVRVELQEQNGRLQAELAAQEALREKAAALERQLKVMASDHREALLDRESENASLREKLR
LREAEIARIRDEEAQRASFLQNAVLAYVQASPVRTLSPPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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