NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11779.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11779.1 Public Homo sapiens 17 TEPSIN 24 110 108 CCDS HistoryNCBI Gene:146705Re-query CCDS DB by CCDS ID:11779.1Re-query CCDS DB by GeneID:146705See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11779.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300714.7 ENSP00000300714.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000300714.7Link to Ensembl Protein Viewer:ENSP00000300714.3Re-query CCDS DB by Nucleotide ID:ENST00000300714Re-query CCDS DB by Protein ID:ENSP00000300714
Original member Current member NCBI NM_144679.3 NP_653280.1 Accepted alive Link to Nucleotide Sequence:NM_144679.3Link to Protein Sequence:NP_653280.1Re-query CCDS DB by Nucleotide ID:NM_144679Re-query CCDS DB by Protein ID:NP_653280Link to BLAST:NP_653280.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653280.1 525 Q96N21-1 525 100% 0 0

Chromosomal Locations for CCDS 11779.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81228928 81229476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81230544 81230678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81231398 81231476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81231578 81231691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81231847 81232021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81233432 81233503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81233638 81233716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81233981 81234048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81236708 81236801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81236980 81237071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81237387 81237459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81238986 81239033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1578 nt):
ATGGCTGCCGCGCCGCCGCTACGGGACCGCCTGAGCTTTCTACACCGGCTCCCGATTCTCCTGAAGGGGA
CGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGTTTGAAGAGATTGCTAAAATCTCCCACGAGTCTCC
GGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGCCACGGGAAGCTC
AAGGTGCTGAAGATCCTGCTCTATCTGTGCAGCCACGGCTCCTCCTTCTTCCTGCTCATCCTCAAACGCA
ACTCTGCCTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTA
CCAGAAGGTTCGCGCGGCCGCGCAGGACTTGGGGAGCACCCTGTTCTCGGACACCGTGTTGCCGCTGGCT
CCCTCCCAGCCTCTGGGGACCCCGCCTGCCACAGGCATGGGCTCCCAGGCCAGGCCGCACAGCACCCTCC
AGGGTTTCGGCTACAGCAAGGAACACGGCCGCACGGCTGTGAGGCATCAGCCTGGGCAGGCCGGAGGGGG
CTGGGATGAGCTGGACAGCGGCCCCAGCTCTCAGAATTCCTCCCAGAACAGCGACCTGAGCAGGGTCTCG
GACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGACCTGGCAGAAA
GGGTCGAGGTGGTGGCCCTGAGTGACTGTCAGCAGGAGTTGAGCTTGGTGAGGACTGTGACTCGGGGACC
ACGCGCCTTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTGTGGACTGCTCAACTGTGAGGCC
GTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGCTGAGGGCGCTGTGTGCCA
TCGCCTCCCTGGGGAGCAGCGACCTCCTCCCCCAGGAGCACATCCTCCTCCGCACCCGGCCGTGGCTGCA
GGAGCTCAGCATGGGCAGCCCGGGACCTGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCC
TCCTGTGGGCAGCTGTCCCCTGCCCGGGGCACCTCAGCTGAGCCTGGCCCCACAGCCGCCCTCCCAGGCC
CATCTGACCTGCTGACCGACGCTGTGCCTCTCCCTGGGAGCCAGGTCTTCCTGCAGCCTCTGAGTTCAAC
CCCGGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCCCACCCCACCCCCA
GATGCCTCCCCCATTCCAGCCCCCGGAGACCCCAGCGAGGCCGAGGCCAGACTGGCAGAAAGCAGGCGGT
GGAGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCG
CGACTCCTTGTTTGCTGGCATGGAGCTGGTGGCCTGTCCCCGCCTGGTGGGGGCTGGGGCTGCTGCGGGA
GAGTCCTGTCCTGATGCTCCCCGCGCCCCCCAAACATCGTCCCAGAGGACAGCAGCCAAAGAGCCTCCTG
GCTCAGAGCCGTCAGCTTTCGCGTTCCTGAACGCCTGA

Translation (525 aa):
MAAAPPLRDRLSFLHRLPILLKGTSDDDVPCPGYLFEEIAKISHESPGSSQCLLEYLLSRLHSSSGHGKL
KVLKILLYLCSHGSSFFLLILKRNSAFIQEAAAFAGPPDPLHGNSLYQKVRAAAQDLGSTLFSDTVLPLA
PSQPLGTPPATGMGSQARPHSTLQGFGYSKEHGRTAVRHQPGQAGGGWDELDSGPSSQNSSQNSDLSRVS
DSGSHSGSDSHSGASREPGDLAERVEVVALSDCQQELSLVRTVTRGPRAFLSREEAQHFIKACGLLNCEA
VLQLLTCHLRGTSECTQLRALCAIASLGSSDLLPQEHILLRTRPWLQELSMGSPGPVTNKATKILRHFEA
SCGQLSPARGTSAEPGPTAALPGPSDLLTDAVPLPGSQVFLQPLSSTPVSSRSPAPSSGMPSSPVPTPPP
DASPIPAPGDPSEAEARLAESRRWRPERIPGGTDSPKRGPSSCAWSRDSLFAGMELVACPRLVGAGAAAG
ESCPDAPRAPQTSSQRTAAKEPPGSEPSAFAFLNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH