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Report for CCDS11697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11697.1 Public Homo sapiens 17 DNAI2 24 110 108 CCDS HistoryNCBI Gene:64446Re-query CCDS DB by CCDS ID:11697.1Re-query CCDS DB by GeneID:64446See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
Nonsense-mediated decay (NMD) candidate

Sequence IDs included in CCDS 11697.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311014.11 ENSP00000308312.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311014.11Link to Ensembl Protein Viewer:ENSP00000308312.6Re-query CCDS DB by Nucleotide ID:ENST00000311014Re-query CCDS DB by Protein ID:ENSP00000308312
Original member Current member EBI ENST00000446837.2 ENSP00000400252.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446837.2Link to Ensembl Protein Viewer:ENSP00000400252.2Re-query CCDS DB by Nucleotide ID:ENST00000446837Re-query CCDS DB by Protein ID:ENSP00000400252
Original member Current member NCBI NM_023036.6 NP_075462.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023036.6Link to Protein Sequence:NP_075462.3Re-query CCDS DB by Nucleotide ID:NM_023036Re-query CCDS DB by Protein ID:NP_075462Link to BLAST:NP_075462.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075462.3 605 Q9GZS0-1 605 100% 0 0

Chromosomal Locations for CCDS 11697.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74281818 74282000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74285040 74285201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74286977 74287098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74289594 74289736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74291020 74291133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74299718 74299857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74301046 74301168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74305219 74305442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74309253 74309388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74310017 74310163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74312003 74312230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74314121 74314216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1818 nt):
ATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC
AGGCCGAGCTGAACATCGACATCATGCCCAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAACCCAGT
GGACACGGGCATCCAGTGCTCGATCAGCATGTCGGAACACGAGGCCAACTCAGAGCGGTTTGAGATGGAG
ACCCGGGGAGTTAACCATGTCGAGGGGGGCTGGCCCAAGGACGTGAACCCCCTGGAGCTGGAGCAGACCA
TCCGTTTCCGGAAGAAAGTGGAGAAAGATGAGAACTACGTTAACGCCATCATGCAGCTCGGCTCTATCAT
GGAGCACTGCATCAAGCAGAACAATGCCATTGACATCTATGAAGAGTATTTCAATGACGAGGAGGCCATG
GAAGTGATGGAGGAGGACCCTTCAGCTAAAACCATCAATGTGTTCAGGGACCCCCAGGAAATCAAGAGGG
CTGCCACACACCTCTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGATTT
TCAGCGGGCACCTGTGGGCATGAGCAGCGATTCATACATCTGGGACCTGGAAAACCCCAACAAGCCTGAA
CTTGCTCTGAAGCCATCGTCTCCACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCACGTACTCCTGG
GTGGCTGCTACAATGGACAGATAGCCTGCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCAC
CATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGC
TTCTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGACATCCGAAAGATGAGCGAGCCCACTGAAGTTG
TGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCGAATC
TACTTTGCCCACCAAGTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAG
ACGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGAGAAACC
CCTTCTACCCGAAGAACTTCCTGACGGTTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGA
ATCGTCCATCATGTGGACCAAGTACCACATGGCTTACCTCACTGATGCTGCCTGGAGCCCCGTGAGGCCG
ACCGTTTTCTTTACCACCAGGATGGACGGAACCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCGATC
CCACCCTCAGCTTGAAGGTGTGTGACGAGGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCAT
CGCCTGCGGCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCTCGCCTGGGCTCTCTACCCTCCAGAGG
AATGAGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGC
ACCGGGAGATGCGGCTGAAGGAGAAGGGTAAGGCGGAGGGCAGGGATGAGGAGCAGACCGATGAGGAGCT
GGCCGTAGACCTGGAGGCGCTGGTCAGCAAGGCCGAGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTG
AAGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACCAGG
TGGTGGAGGAGGGAGAGGAAGCAGCGGGGGAAGAAGGGGATGAAGAAGTGGAAGAAGACTTAGCCTAG

Translation (605 aa):
MEIVYVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANSERFEME
TRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQNNAIDIYEEYFNDEEAM
EVMEEDPSAKTINVFRDPQEIKRAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSYIWDLENPNKPE
LALKPSSPLVTLEFNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIESSHRDPVYGTIWLQSKTGTEC
FSASTDGQVMWWDIRKMSEPTEVVILDITKKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAK
TSAEKIVCTFPGHHGPIYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKYHMAYLTDAAWSPVRP
TVFFTTRMDGTLDIWDFMFEQCDPTLSLKVCDEALFCLRVQDNGCLIACGSQLGTTTLLEVSPGLSTLQR
NEKNVASSMFERETRREKILEARHREMRLKEKGKAEGRDEEQTDEELAVDLEALVSKAEEEFFDIIFAEL
KKKEADAIKLTPVPQQPSPEEDQVVEEGEEAAGEEGDEEVEEDLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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