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Report for CCDS11677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11677.1 Public Homo sapiens 17 WIPI1 24 110 108 CCDS HistoryNCBI Gene:55062Re-query CCDS DB by CCDS ID:11677.1Re-query CCDS DB by GeneID:55062See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262139.10 ENSP00000262139.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262139.10Link to Ensembl Protein Viewer:ENSP00000262139.4Re-query CCDS DB by Nucleotide ID:ENST00000262139Re-query CCDS DB by Protein ID:ENSP00000262139
Original member Current member NCBI NM_017983.7 NP_060453.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017983.7Link to Protein Sequence:NP_060453.3Re-query CCDS DB by Nucleotide ID:NM_017983Re-query CCDS DB by Protein ID:NP_060453Link to BLAST:NP_060453.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060453.3 446 Q5MNZ9-1 446 100% 0 0

Chromosomal Locations for CCDS 11677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 68421773 68421820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68426075 68426175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68427135 68427253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68428829 68428936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68429996 68430160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68433468 68433575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68434556 68434626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68435620 68435712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68436382 68436479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68444493 68444589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68450728 68450897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68452910 68452992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68457342 68457421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGAGGCCGAGGCCGCGGACGCTCCCCCGGGCGGGGTTGAGTCGGCGCTCAGCTGCTTCTCTTTCAACC
AGGACTGCACATCCCTAGCAACTGGAACTAAAGCCGGGTATAAGCTGTTTTCTCTGAGTTCTGTGGAGCA
GCTGGATCAAGTCCACGGAAGCAATGAAATCCCGGACGTCTACATCGTGGAGCGCCTCTTCTCCAGCAGC
CTGGTGGTGGTAGTCAGTCACACAAAACCACGGCAGATGAACGTGTATCACTTCAAGAAAGGCACAGAGA
TCTGTAATTACAGCTACTCCAGCAACATCTTGTCCATAAGGCTGAACCGGCAAAGGCTGCTGGTTTGCCT
AGAAGAGTCCATTTATATTCACAACATTAAAGACATGAAGCTGTTGAAGACCCTCCTGGATATTCCTGCA
AACCCAACAGGTCTATGTGCTCTCTCTATCAACCATTCCAATTCTTACCTGGCCTATCCTGGAAGCCTGA
CTTCAGGGGAGATTGTGCTTTATGATGGAAACTCCCTGAAAACAGTCTGCACTATTGCTGCCCATGAGGG
AACACTAGCTGCCATCACCTTCAATGCCTCAGGCTCCAAACTAGCAAGTGCGTCTGAAAAAGGCACAGTC
ATCCGGGTGTTCTCTGTCCCTGATGGGCAAAAGCTCTATGAGTTCCGGAGAGGGATGAAAAGGTATGTGA
CAATCAGCTCTCTAGTGTTCAGTATGGATTCACAATTCCTCTGCGCCTCCAGTAACACCGAGACGGTACA
CATCTTCAAGCTGGAACAGGTCACCAACAGTCGACCAGAAGAGCCTTCGACCTGGAGTGGCTACATGGGA
AAGATGTTTATGGCTGCTACCAACTACCTCCCTACCCAGGTGTCAGACATGATGCATCAGGACAGGGCTT
TTGCCACTGCACGCTTGAACTTCTCCGGACAGAGGAACATCTGTACCCTCTCAACGATCCAGAAGTTGCC
ACGGCTGCTAGTTGCGTCATCCAGTGGACACCTTTATATGTACAATTTGGATCCTCAGGATGGAGGAGAG
TGTGTCTTAATCAAAACCCACAGCTTGCTTGGCTCAGGAACAACAGAAGAGAATAAAGAAAATGACCTCA
GACCTTCCTTACCTCAGTCTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCC
AGGTTATTCTGAGGACGGCGGGGCGCTGCGAGGAGAAGTTATTCCTGAACATGAGTTTGCGACGGGACCA
GTGTGTCTTGATGATGAGAATGAGTTTCCTCCTATAATCTTGTGCCGTGGAAATCAGAAGGGCAAAACGA
AGCAGTCATGA

Translation (446 aa):
MEAEAADAPPGGVESALSCFSFNQDCTSLATGTKAGYKLFSLSSVEQLDQVHGSNEIPDVYIVERLFSSS
LVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEESIYIHNIKDMKLLKTLLDIPA
NPTGLCALSINHSNSYLAYPGSLTSGEIVLYDGNSLKTVCTIAAHEGTLAAITFNASGSKLASASEKGTV
IRVFSVPDGQKLYEFRRGMKRYVTISSLVFSMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWSGYMG
KMFMAATNYLPTQVSDMMHQDRAFATARLNFSGQRNICTLSTIQKLPRLLVASSSGHLYMYNLDPQDGGE
CVLIKTHSLLGSGTTEENKENDLRPSLPQSYAATVARPSASSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGNQKGKTKQS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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