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Report for CCDS11630.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11630.1 Public Homo sapiens 17 NACA2 24 110 108 CCDS HistoryNCBI Gene:342538Re-query CCDS DB by CCDS ID:11630.1Re-query CCDS DB by GeneID:342538See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11630.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000521764.3 ENSP00000427802.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000521764.3Link to Ensembl Protein Viewer:ENSP00000427802.1Re-query CCDS DB by Nucleotide ID:ENST00000521764Re-query CCDS DB by Protein ID:ENSP00000427802
Original member Current member NCBI NM_199290.4 NP_954984.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199290.4Link to Protein Sequence:NP_954984.1Re-query CCDS DB by Nucleotide ID:NM_199290Re-query CCDS DB by Protein ID:NP_954984Link to BLAST:NP_954984.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954984.1 215 Q9H009 215 100% 0 0

Chromosomal Locations for CCDS 11630.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 61590533 61591180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (648 nt):
ATGCCGGGCGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCGCAGTCCCAGGCTGAGACAG
GGTCTGGAACAGCATCTGATAGTGGTGAATCAGTACCAGGGATTGAAGAACAGGATTCCACCCAGACCAC
CACACAAAAAGCCTGGCTGGTGGCAGCAGCTGAAATTGATGAAGAACCAGTCGGTAAAGCAAAACAGAGT
CGGAGTGAAAAGAGGGCACGGAAGGCTATGTCCAAACTGGGTCTTCTACAGGTTACAGGAGTTACTAGAG
TCACTATCTGGAAATCTAAGAATATCCTCTTTGTCATCACAAAACTGGACGTCTACAAGAGCCCTGCTTC
GGATGCCTACATAGTTTTTGGGGAAGCCAAGATCCAAGATTTATCTCAGCAAGCACAACTAGCAGCTGCG
GAGAAATTCAGAGTTCAAGGTGAAGCTGTCGGAAACATTCAAGAAAACACACAGACTCCAACTGTACAAG
AGGAGAGTGAAGAGGAAGAGGTCGATGAAACAGGTGTAGAAGTTAAAGACGTGAAATTGGTCATGTCACA
AGCAAATGTGTCGAGAGCAAAGGCAGTCCGAGCTCTGAAGAACAACAGTAATGATATTGTAAATGCGATT
ATGGAATTAACAGTGTAA

Translation (215 aa):
MPGEATETVPATEQELPQSQAETGSGTASDSGESVPGIEEQDSTQTTTQKAWLVAAAEIDEEPVGKAKQS
RSEKRARKAMSKLGLLQVTGVTRVTIWKSKNILFVITKLDVYKSPASDAYIVFGEAKIQDLSQQAQLAAA
EKFRVQGEAVGNIQENTQTPTVQEESEEEEVDETGVEVKDVKLVMSQANVSRAKAVRALKNNSNDIVNAI
MELTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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