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Report for CCDS11608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11608.1 Public Homo sapiens 17 MTMR4 24 110 108 CCDS HistoryNCBI Gene:9110Re-query CCDS DB by CCDS ID:11608.1Re-query CCDS DB by GeneID:9110See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11608.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323456.9 ENSP00000325285.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000323456.9Link to Ensembl Protein Viewer:ENSP00000325285.5Re-query CCDS DB by Nucleotide ID:ENST00000323456Re-query CCDS DB by Protein ID:ENSP00000325285
Original member Current member NCBI NM_004687.5 NP_004678.3 Accepted alive Link to Nucleotide Sequence:NM_004687.5Link to Protein Sequence:NP_004678.3Re-query CCDS DB by Nucleotide ID:NM_004687Re-query CCDS DB by Protein ID:NP_004678Link to BLAST:NP_004678.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004678.3 1195 Q9NYA4 1195 100% 0 0

Chromosomal Locations for CCDS 11608.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 58491663 58491840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58492511 58492599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58492842 58492952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58494932 58496330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58503744 58503898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58504050 58504220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58504303 58504488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58504779 58504974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58505472 58505583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58506743 58506871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58507123 58507319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58508161 58508274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58508468 58508564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58508681 58508841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58511429 58511511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58512390 58512506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58512852 58512941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58516580 58516582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3588 nt):
ATGGGTGAGGAGGGGCCCCCCAGCCTGGAGTACATCCAAGCCAAGGATCTGTTCCCCCCCAAGGAACTAG
TGAAGGAGGAAGAGAATCTTCAGGTCCCCTTCACAGTGCTGCAGGGTGAGGGAGTAGAGTTCCTGGGCCG
GGCAGCCGATGCCCTCATTGCCATCTCTAACTACCGGCTGCATATCAAATTCAAGGACTCTGTCATCAAC
GTCCCCCTCCGGATGATTGACAGTGTGGAGAGCCGTGATATGTTCCAGTTGCACATTTCCTGCAAGGACT
CCAAAGTGGTGAGGTGCCACTTCTCCACTTTTAAGCAGTGCCAAGAGTGGCTCTCACGGCTAAGCCGAGC
CACAGCAAGACCTGCCAAGCCTGAAGACCTCTTTGCCTTTGCCTACCATGCCTGGTGCCTGGGGCTGACC
GAGGAGGACCAGCACACTCACCTATGTCAGCCAGGTGAGCACATACGTTGTCGACAGGAGGCGGAGCTTG
CAAGGATGGGCTTTGACCTGCAGAACGTCTGGAGAGTCTCACACATCAACAGCAACTACAAATTGTGCCC
CAGTTACCCCCAGAAGCTGCTGGTTCCTGTGTGGATCACTGACAAAGAGCTGGAGAACGTGGCTTCCTTC
CGCTCCTGGAAGCGGATTCCCGTGGTTGTGTATAGACACTTGCGCAATGGGGCTGCCATCGCCCGCTGCA
GCCAGCCAGAGATCAGCTGGTGGGGCTGGCGCAATGCTGATGATGAGTACCTGGTCACGTCCATTGCTAA
AGCCTGTGCCCTGGACCCGGGGACAAGGGCCACTGGGGGCTCCCTCAGCACCGGGAATAATGATACCAGC
GAGGCGTGTGATGCTGACTTTGATTCTTCTCTGACTGCGTGCTCTGGAGTGGAGAGCACAGCAGCTCCTC
AAAAGCTGCTGATCCTGGATGCGCGATCCTACACGGCAGCAGTGGCCAACCGGGCCAAGGGTGGAGGCTG
TGAATGTGAAGAGTACTATCCCAACTGTGAGGTCGTGTTCATGGGAATGGCCAACATCCATGCCATCCGG
AACAGCTTTCAGTACCTCCGGGCTGTGTGTAGCCAGATGCCGGATCCTAGCAACTGGTTGTCGGCACTGG
AGAGTACCAAATGGCTGCAGCACTTGTCGGTGATGCTAAAAGCAGCTGTGCTGGTGGCTAATACAGTAGA
CCGGGAAGGCCGGCCTGTGCTGGTACACTGCTCAGATGGCTGGGACCGCACACCGCAGATCGTAGCCCTG
GCCAAAATATTACTGGACCCATATTACAGGACGTTGGAGGGCTTCCAAGTGTTAGTGGAGTCTGACTGGC
TGGATTTTGGGCACAAGTTTGGAGATCGCTGTGGCCACCAAGAGAATGTGGAGGACCAAAACGAACAATG
CCCTGTGTTCCTCCAGTGGCTTGATTCTGTTCATCAGTTGCTTAAGCAGTTCCCCTGCCTGTTTGAATTT
AATGAAGCATTCCTGGTAAAACTGGTGCAACACACATACTCCTGCCTCTACGGCACCTTCCTGGCCAACA
ACCCCTGTGAGCGAGAGAAGCGCAACATCTACAAGCGGACCTGCTCTGTGTGGGCGCTCCTTCGAGCTGG
CAATAAAAACTTTCATAACTTCCTCTACACACCCAGCTCAGACATGGTCCTGCATCCTGTTTGTCATGTC
CGGGCCCTGCACCTCTGGACAGCTGTTTATCTGCCAGCATCATCTCCATGCACACTTGGGGAAGAAAACA
TGGATCTTTACCTTTCCCCAGTGGCCCAGAGCCAGGAGTTCTCTGGCCGCTCTCTGGACAGATTACCTAA
AACCAGATCCATGGATGATCTTCTTTCTGCCTGTGACACAAGCAGCCCCCTGACTCGTACATCCAGTGAC
CCTAACCTGAATAACCACTGTCAGGAGGTCAGGGTAGGCCTGGAGCCCTGGCACAGCAATCCTGAGGGAT
CAGAGACAAGCTTTGTGGACTCTGGGGTAGGAGGGCCTCAGCAAACTGTAGGAGAAGTGGGTCTTCCTCC
TCCTCTGCCCAGCAGCCAGAAAGACTACTTGAGCAATAAACCTTTCAAGAGTCACAAAAGCTGTTCTCCA
AGTTACAAACTGCTTAATACCGCAGTGCCTCGGGAAATGAAGAGCAACACCTCTGATCCTGAGATCAAAG
TCCTAGAAGAGACTAAGGGACCAGCTCCAGACCCTTCTGCCCAGGATGAGCTGGGTAGGACTTTAGATGG
CATAGGGGAGCCACCTGAACATTGTCCTGAAACAGAAGCTGTCAGTGCACTCTCCAAGGTCATTTCTAAC
AAGTGTGATGGAGTTTGTAATTTTCCTGAGTCTTCCCAGAACTCTCCTACAGGTACGCCCCAACAGGCCC
AGCCAGACTCCATGCTAGGTGTGCCCTCCAAGTGTGTTCTTGATCACAGCCTCAGCACCGTTTGCAACCC
ACCGAGTGCTGCCTGCCAAACTCCTCTAGACCCAAGCACTGACTTCCTCAACCAAGATCCCTCAGGGTCT
GTGGCAAGTATCTCCCACCAGGAACAACTGAGTTCTGTGCCGGATCTGACCCATGGGGAGGAAGACATTG
GTAAAAGAGGAAATAATAGGAATGGGCAGTTATTGGAAAATCCTCGCTTTGGGAAAATGCCATTGGAATT
GGTCCGGAAGCCAATTTCTCAGAGCCAGATCAGTGAGTTCTCTTTTCTAGGGTCCAACTGGGACAGCTTC
CAAGGGATGGTGACTTCATTCCCAAGTGGGGAGGCCACCCCTCGGCGGCTGCTTTCCTATGGCTGTTGTA
GCAAGAGGCCAAACAGTAAGCAGATGCGGGCCACAGGGCCCTGCTTTGGGGGCCAGTGGGCTCAGAGAGA
AGGTGTGAAGTCACCTGTCTGTTCTAGTCATTCCAATGGACATTGTACTGGCCCAGGAGGAAAGAACCAG
ATGTGGTTGTCCAGTCATCCAAAGCAAGTCTCTAGCACAAAGCCCGTTCCACTGAACTGCCCTTCTCCAG
TGCCTCCTCTGTATTTGGATGATGATGGACTCCCCTTTCCCACGGATGTGATCCAGCATAGGTTACGGCA
AATCGAAGCAGGGTACAAACAAGAGGTGGAGCAGCTACGTCGACAGGTGCGTGAGCTTCAGATGAGGCTG
GACATCCGTCACTGCTGTGCCCCTCCAGCAGAGCCCCCCATGGACTATGAGGATGATTTTACATGTTTGA
AGGAGTCAGATGGCAGTGATACTGAGGATTTTGGCTCTGATCACAGTGAAGACTGCCTTTCAGAAGCAAG
CTGGGAACCTGTTGATAAGAAAGAGACTGAGGTGACTCGCTGGGTTCCAGACCATATGGCATCACACTGC
TATAACTGTGACTGTGAATTCTGGTTGGCCAAACGAAGACACCATTGCAGAAATTGTGGGAATGTATTTT
GTGCTGGATGCTGCCACCTGAAGCTGCCCATTCCTGATCAGCAACTCTATGACCCAGTTCTCGTCTGTAA
CTCATGTTACGAACACATTCAAGTCTCTCGTGCCAGGGAACTCATGAGCCAACAGCTGAAGAAACCCATT
GCTACAGCTTCCAGTTGA

Translation (1195 aa):
MGEEGPPSLEYIQAKDLFPPKELVKEEENLQVPFTVLQGEGVEFLGRAADALIAISNYRLHIKFKDSVIN
VPLRMIDSVESRDMFQLHISCKDSKVVRCHFSTFKQCQEWLSRLSRATARPAKPEDLFAFAYHAWCLGLT
EEDQHTHLCQPGEHIRCRQEAELARMGFDLQNVWRVSHINSNYKLCPSYPQKLLVPVWITDKELENVASF
RSWKRIPVVVYRHLRNGAAIARCSQPEISWWGWRNADDEYLVTSIAKACALDPGTRATGGSLSTGNNDTS
EACDADFDSSLTACSGVESTAAPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHAIR
NSFQYLRAVCSQMPDPSNWLSALESTKWLQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVAL
AKILLDPYYRTLEGFQVLVESDWLDFGHKFGDRCGHQENVEDQNEQCPVFLQWLDSVHQLLKQFPCLFEF
NEAFLVKLVQHTYSCLYGTFLANNPCEREKRNIYKRTCSVWALLRAGNKNFHNFLYTPSSDMVLHPVCHV
RALHLWTAVYLPASSPCTLGEENMDLYLSPVAQSQEFSGRSLDRLPKTRSMDDLLSACDTSSPLTRTSSD
PNLNNHCQEVRVGLEPWHSNPEGSETSFVDSGVGGPQQTVGEVGLPPPLPSSQKDYLSNKPFKSHKSCSP
SYKLLNTAVPREMKSNTSDPEIKVLEETKGPAPDPSAQDELGRTLDGIGEPPEHCPETEAVSALSKVISN
KCDGVCNFPESSQNSPTGTPQQAQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLDPSTDFLNQDPSGS
VASISHQEQLSSVPDLTHGEEDIGKRGNNRNGQLLENPRFGKMPLELVRKPISQSQISEFSFLGSNWDSF
QGMVTSFPSGEATPRRLLSYGCCSKRPNSKQMRATGPCFGGQWAQREGVKSPVCSSHSNGHCTGPGGKNQ
MWLSSHPKQVSSTKPVPLNCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEAGYKQEVEQLRRQVRELQMRL
DIRHCCAPPAEPPMDYEDDFTCLKESDGSDTEDFGSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHC
YNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHIQVSRARELMSQQLKKPI
ATASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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