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Report for CCDS11570.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11570.1 Public Homo sapiens 17 EPN3 24 110 108 CCDS HistoryNCBI Gene:55040Re-query CCDS DB by CCDS ID:11570.1Re-query CCDS DB by GeneID:55040See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11570.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268933.8 ENSP00000268933.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268933.8Link to Ensembl Protein Viewer:ENSP00000268933.3Re-query CCDS DB by Nucleotide ID:ENST00000268933Re-query CCDS DB by Protein ID:ENSP00000268933
Original member Current member NCBI NM_017957.3 NP_060427.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017957.3Link to Protein Sequence:NP_060427.2Re-query CCDS DB by Nucleotide ID:NM_017957Re-query CCDS DB by Protein ID:NP_060427Link to BLAST:NP_060427.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060427.2 632 Q9H201-1 632 100% 0 0

Chromosomal Locations for CCDS 11570.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 50536557 50537118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50538079 50538197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50538884 50538964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50539187 50539315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50540247 50540334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50540793 50541062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50541229 50541333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50541464 50541694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50541844 50542157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGACGACCTCCGCACTCCGGCGCCAGGTGAAGAACATCGTGCACAACTACTCCGAGGCAGAAATCAAGG
TGCGCGAGGCCACCAGCAATGACCCCTGGGGCCCCCCTAGTTCGCTCATGTCCGAGATCGCTGACCTGAC
CTTCAACACAGTGGCCTTCACCGAAGTCATGGGCATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGAAC
TGGCGGCACGTGTACAAGGCTCTAACATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGCGGGTGGCCC
ACCAGTGCCGCGAGAACCTCTACACCATCCAGACACTCAAGGACTTCCAGTACATCGACCGCGACGGCAA
GGACCAGGGCGTCAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCTG
CGGCAGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG
GGCAGCTGGGCTTCAGCCGCCGCTACGGCGAGGACTACAGCCGCTCCCGGGGCTCCCCGTCCTCCTACAA
CTCCTCCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGGCCCGGCCTCAGACGTCAGGGGAAGAG
GAACTGCAGCTGCAGCTGGCCCTCGCCATGAGCCGTGAGGAGGCAGAGAAGCCTGTCCCCCCAGCCTCCC
ACAGGGACGAGGACCTGCAGCTGCAGCTGGCTCTGCGCCTGAGCCGGCAGGAGCACGAGAAGGAGGTGAG
GTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGA
GAGCCTGAGAGAGAAGAGAGAAAGGAGGAGGAGAAGCTAAAAACCAGCCAGTCCTCCATCCTGGACTTGG
CTGACATCTTCGTACCTGCCCTGGCCCCGCCCTCCACACACTGCTCTGCTGACCCATGGGACATCCCAGG
TTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCGATCCCC
TCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCCTCTGAGCCCTGGG
GCAGGACCCCAGTGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGGCCCTGAACTCTCCCCACCACAA
ACTCCCCAGCACTGGGGCTGACCCTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCG
ACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGCAGGCCCTGCCCT
CTGGGAAGCCCAGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATGG
CACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGCC
CGAGCTTGCCGGACTCCCGAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG
TCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAA
CCCGTTCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGC
CTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTGCCCCTCCCGCTCA
GCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACC
GCAGCCGCTGCTGCCCACGCCGAGCTCAGCCGGGCCGCGGCCCCCGCCCCCGCAGACCGGCACCAACCCC
TTCCTCTGA

Translation (632 aa):
MTTSALRRQVKNIVHNYSEAEIKVREATSNDPWGPPSSLMSEIADLTFNTVAFTEVMGMLWRRLNDSGKN
WRHVYKALTLLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQGVNVREKVKQVMALLKDEERL
RQERTHALKTKERMALEGIGIGSGQLGFSRRYGEDYSRSRGSPSSYNSSSSSPRYTSDLEQARPQTSGEE
ELQLQLALAMSREEAEKPVPPASHRDEDLQLQLALRLSRQEHEKEVRSWQGDGSPMANGAGAVVHHQRDR
EPEREERKEEEKLKTSQSSILDLADIFVPALAPPSTHCSADPWDIPGFRPNTEASGSSWGPSADPWSPIP
SGTVLSRSQPWDLTPMLSSSEPWGRTPVLPAGPPTTDPWALNSPHHKLPSTGADPWGASLETSDTPGGAS
TFDPFAKPPESTETKEGLEQALPSGKPSSPVELDLFGDPSPSSKQNGTKEPDALDLGILGEALTQPSKEA
RACRTPESFLGPSASSLVNLDSLVKAPQVAKTRNPFLTGLSAPSPTNPFGAGEPGRPTLNQMRTGSPALG
LAGGPVGAPLGSMTYSASLPLPLSSVPAGLTLPASVSVFPQAGAFAPQPLLPTPSSAGPRPPPPQTGTNP
FL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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