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Report for CCDS11395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11395.1 Public Homo sapiens 17 KRT36 24 110 108 CCDS HistoryNCBI Gene:8689Re-query CCDS DB by CCDS ID:11395.1Re-query CCDS DB by GeneID:8689See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328119.11 ENSP00000329165.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328119.11Link to Ensembl Protein Viewer:ENSP00000329165.6Re-query CCDS DB by Nucleotide ID:ENST00000328119Re-query CCDS DB by Protein ID:ENSP00000329165
Original member Current member NCBI NM_003771.5 NP_003762.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003771.5Link to Protein Sequence:NP_003762.1Re-query CCDS DB by Nucleotide ID:NM_003771Re-query CCDS DB by Protein ID:NP_003762Link to BLAST:NP_003762.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003762.1 467 O76013-1 467 100% 0 0

Chromosomal Locations for CCDS 11395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41486376 41486571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41486950 41487170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41487351 41487476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41487576 41487737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41488243 41488399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41488642 41488724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41489406 41489864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGGCCACCCAGACCTGCACCCCTACCTTCTCCACTGGGTCTATCAAGGGCCTCTGTGGCACAGCAGGCG
GCATCTCTCGGGTGTCCTCCATCCGTTCTGTGGGCTCCTGCAGGGTCCCCAGTCTCGCCGGTGCTGCAGG
GTACATCTCTTCTGCTAGGTCGGGCCTCTCTGGCCTTGGGAGCTGCTTGCCTGGCTCCTACCTGTCTTCT
GAGTGCCACACCTCTGGCTTTGTGGGGAGCGGGGGCTGGTTCTGCGAGGGCTCCTTCAACGGCAGCGAGA
AGGAGACTATGCAGTTCCTGAACGACCGCCTGGCCAACTACCTGGAGAAGGTGCGTCAGCTGGAGCGGGA
GAACGCGGAGCTGGAGAGCCGCATCCAGGAGTGGTACGAGTTTCAGATCCCATACATCTGCCCAGACTAC
CAGTCCTACTTCAAGACCATCGAAGATTTCCAGCAGAAGATCCTGCTGACTAAGTCTGAGAATGCCAGGC
TGGTCCTGCAGATTGATAATGCCAAGCTGGCTGCTGACGACTTCCGGACCAAGTATGAGACAGAGCTGTC
TCTGCGGCAGCTAGTGGAGGCCGACATCAACGGCCTGCGTAGGATCCTGGATGAGCTGACCCTGTGCAAG
GCTGACCTGGAGGCTCAGGTGGAGTCCCTGAAGGAGGAGCTGATGTGCCTCAAGAAGAATCACGAGGAGG
AAGTCAGTGTACTCCGTTGCCAACTTGGGGACCGACTGAATGTGGAGGTGGACGCTGCTCCCCCAGTGGA
TCTCAACAAGATCCTGGAGGATATGAGATGCCAGTACGAGGCCCTGGTGGAGAATAACCGCAGAGATGTG
GAGGCCTGGTTCAACACCCAGACTGAGGAGCTGAACCAGCAGGTGGTGTCCAGCTCGGAGCAGCTGCAGT
GCTGCCAGACGGAGATCATCGAGCTGAGACGTACGGTCAACGCGCTAGAGATTGAGCTGCAGGCTCAGCA
CAGCATGCGGAATTCCTTGGAATCCACCCTGGCCGAAACCGAGGCCCGCTACAGCTCCCAGCTGGCCCAG
ATGCAGTGCCTGATCAGCAACGTGGAGGCCCAGCTGTCTGAGATCCGCTGCGACCTGGAGCGGCAGAACC
AGGAGTACCAGGTGTTACTGGACGTCAAGGCCCGGCTGGAGGGCGAGATCGCTACCTACCGCCACCTGCT
GGAGGGAGAGGACTGCAAGCTTCCTCCCCAACCTTGTGCCACGGCATGCAAGCCTGTTATTAGAGTTCCT
TCTGTCCCCCCGGTGCCCTGTGTCCCCTCTGTGCCCTGCACCCCGGCTCCCCAGGTTGGCACTCAGATCC
GCACCATCACCGAGGAGATCAGAGATGGGAAAGTCATCTCCTCCAGGGAGCACGTGCAGTCCCGCCCGCT
GTGA

Translation (467 aa):
MATQTCTPTFSTGSIKGLCGTAGGISRVSSIRSVGSCRVPSLAGAAGYISSARSGLSGLGSCLPGSYLSS
ECHTSGFVGSGGWFCEGSFNGSEKETMQFLNDRLANYLEKVRQLERENAELESRIQEWYEFQIPYICPDY
QSYFKTIEDFQQKILLTKSENARLVLQIDNAKLAADDFRTKYETELSLRQLVEADINGLRRILDELTLCK
ADLEAQVESLKEELMCLKKNHEEEVSVLRCQLGDRLNVEVDAAPPVDLNKILEDMRCQYEALVENNRRDV
EAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNALEIELQAQHSMRNSLESTLAETEARYSSQLAQ
MQCLISNVEAQLSEIRCDLERQNQEYQVLLDVKARLEGEIATYRHLLEGEDCKLPPQPCATACKPVIRVP
SVPPVPCVPSVPCTPAPQVGTQIRTITEEIRDGKVISSREHVQSRPL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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