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Report for CCDS11393.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11393.1 Public Homo sapiens 17 KRT32 24 110 108 CCDS HistoryNCBI Gene:3882Re-query CCDS DB by CCDS ID:11393.1Re-query CCDS DB by GeneID:3882See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11393.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000225899.4 ENSP00000225899.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000225899.4Link to Ensembl Protein Viewer:ENSP00000225899.3Re-query CCDS DB by Nucleotide ID:ENST00000225899Re-query CCDS DB by Protein ID:ENSP00000225899
Original member Current member NCBI NM_002278.3 NP_002269.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002278.3Link to Protein Sequence:NP_002269.3Re-query CCDS DB by Nucleotide ID:NM_002278Re-query CCDS DB by Protein ID:NP_002269Link to BLAST:NP_002269.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002269.3 448 Q14532 448 100% 0 0

Chromosomal Locations for CCDS 11393.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41460110 41460239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41462830 41463050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41464078 41464203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41464282 41464443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41465773 41465929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41466094 41466176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41466858 41467325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGG
TCTGTTCCAGCGGCGTGAACTGCCGGCCTGAGCTGTGCCTGGGCTATGTCTGCCAGCCCATGGCATGCCT
GCCTTCGGTCTGCCTGCCCACCACCTTCCGGCCAGCCAGCTGCCTCTCCAAAACCTATCTATCCAGTTCC
TGCCAGGCAGCCAGTGGCATCTCCGGCTCCATGGGCCCCGGCAGCTGGTACAGCGAAGGGGCCTTCAATG
GCAATGAGAAGGAAACCATGCAGTTCCTTAACGACCGCCTGGCCAGCTACCTGACGAGGGTGCGGCAGCT
GGAGCAGGAGAATGCGGAGCTGGAGAGCAGGATCCAAGAGGCCTCTCACTCCCAGGTGCTCACCATGACT
CCTGACTACCAGTCTCATTTCAGGACCATTGAGGAGCTCCAGCAGAAGATTCTGTGTACCAAGGCAGAGA
ATGCCAGGATGGTTGTGAACATTGATAATGCCAAACTGGCTGCCGATGACTTCAGGGCCAAGTACGAGGC
AGAGCTGGCCATGCGGCAGCTGGTGGAGGCCGACATCAATGGCCTGCGCAGGATCCTGGATGATCTCACT
CTGTGCAAGGCTGACCTGGAGGCCCAGGTTGAGTCCCTGAAGGAGGAGCTGATGTGCCTCAAAAAGAACC
ATGAGGAGGAAGTCGGTTCCCTTCGATGCCAGCTTGGGGACCGCCTTAACATCGAGGTGGACGCTGCACC
CCCGGTGGACCTGACCAGGGTGCTGGAGGAGATGCGGTGTCAGTACGAGGCCATGGTGGAGGCCAACCGC
AGGGACGTGGAGGAATGGTTCAATATGCAGATGGAGGAGCTTAACCAACAGGTGGCCACAAGCTCTGAGC
AGCTTCAGAACTACCAGTCAGACATCATTGACCTGAGACGCACGGTCAACACGCTGGAGATCGAGCTGCA
GGCCCAGCACAGCCTGAGGGACTCCCTGGAAAACACGCTGACGGAGAGTGAGGCCCGCTACAGCTCCCAG
CTGGCCCAGATGCAGTGCATGATCACCAACGTTGAGGCCCAGCTGGCTGAGATCCGGGCTGACCTGGAGC
GGCAGAACCAGGAGTACCAGGTGCTGCTGGACGTCCGGGCCCGGCTGGAGGGCGAGATCAACACGTACCG
GAGCCTGCTGGAGAACGAGGACTGCAAGCTGCCCTGTAACCCATGCTCCACTCCTTCCTGCACCACCTGT
GTGCCCTCCCCATGCGTGCCCCGCACCGTCTGTGTGCCACGCACTGTTGGCATGCCTTGCTCACCCTGCC
CCCAGGGCCGCTACTGA

Translation (448 aa):
MTSSCCVTNNLQASLKSCPRPASVCSSGVNCRPELCLGYVCQPMACLPSVCLPTTFRPASCLSKTYLSSS
CQAASGISGSMGPGSWYSEGAFNGNEKETMQFLNDRLASYLTRVRQLEQENAELESRIQEASHSQVLTMT
PDYQSHFRTIEELQQKILCTKAENARMVVNIDNAKLAADDFRAKYEAELAMRQLVEADINGLRRILDDLT
LCKADLEAQVESLKEELMCLKKNHEEEVGSLRCQLGDRLNIEVDAAPPVDLTRVLEEMRCQYEAMVEANR
RDVEEWFNMQMEELNQQVATSSEQLQNYQSDIIDLRRTVNTLEIELQAQHSLRDSLENTLTESEARYSSQ
LAQMQCMITNVEAQLAEIRADLERQNQEYQVLLDVRARLEGEINTYRSLLENEDCKLPCNPCSTPSCTTC
VPSPCVPRTVCVPRTVGMPCSPCPQGRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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