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Report for CCDS11364.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11364.1 Public Homo sapiens 17 WIPF2 24 110 108 CCDS HistoryNCBI Gene:147179Re-query CCDS DB by CCDS ID:11364.1Re-query CCDS DB by GeneID:147179See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11364.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323571.9 ENSP00000320924.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323571.9Link to Ensembl Protein Viewer:ENSP00000320924.4Re-query CCDS DB by Nucleotide ID:ENST00000323571Re-query CCDS DB by Protein ID:ENSP00000320924
Original member Current member EBI ENST00000583130.5 ENSP00000462350.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000583130.5Link to Ensembl Protein Viewer:ENSP00000462350.1Re-query CCDS DB by Nucleotide ID:ENST00000583130Re-query CCDS DB by Protein ID:ENSP00000462350
Original member Current member EBI ENST00000585043.5 ENSP00000462826.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000585043.5Link to Ensembl Protein Viewer:ENSP00000462826.1Re-query CCDS DB by Nucleotide ID:ENST00000585043Re-query CCDS DB by Protein ID:ENSP00000462826
Original member Current member NCBI NM_133264.5 NP_573571.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133264.5Link to Protein Sequence:NP_573571.1Re-query CCDS DB by Nucleotide ID:NM_133264Re-query CCDS DB by Protein ID:NP_573571Link to BLAST:NP_573571.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_573571.1 440 Q8TF74-1 440 100% 0 0

Chromosomal Locations for CCDS 11364.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 40256460 40256522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40260535 40260667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40262525 40262641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40264490 40265146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40273790 40273999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40277083 40277184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40278185 40278225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1323 nt):
ATGCCAATTCCTCCTCCCCCGCCACCCCCACCTGGTCCTCCTCCACCTCCCACATTTCATCAGGCAAACA
CAGAGCAGCCCAAGCTGAGTAGAGATGAGCAGCGGGGTCGAGGCGCCCTCTTACAGGACATTTGCAAAGG
GACCAAGCTGAAGAAGGTGACCAACATTAATGATCGGAGTGCTCCCATCCTCGAGAAGCCGAAAGGAAGC
AGTGGTGGCTATGGCTCTGGAGGAGCTGCCCTGCAGCCCAAGGGAGGTCTCTTCCAAGGAGGAGTGCTGA
AGCTTCGACCTGTGGGAGCCAAGGATGGTTCAGAGAACCTAGCTGGTAAGCCAGCCCTGCAAATCCCCAG
TTCTCGAGCTGCTGCCCCAAGGCCTCCAGTATCTGCCGCCAGCGGGCGTCCTCAGGATGATACAGACAGC
AGCCGGGCCTCACTCCCAGAACTGCCCCGGATGCAGAGACCCTCTTTACCGGACCTCTCTCGGCCTAATA
CCACCAGCAGTACGGGCATGAAGCACAGCTCCTCTGCCCCTCCCCCACCACCCCCAGGGCGGCGTGCCAA
CGCACCCCCCACACCTCTGCCTATGCACAGCAGCAAAGCCCCCGCCTACAACAGAGAGAAACCCTTGCCA
CCGACGCCTGGACAAAGGCTTCACCCTGGTCGAGAGGGACCTCCTGCTCCACCCCCAGTCAAACCACCTC
CTTCCCCTGTGAATATCAGAACAGGACCAAGTGGCCAGTCTCTGGCTCCTCCTCCTCCGCCTTACCGCCA
GCCTCCTGGGGTCCCCAATGGACCCTCTAGCCCCACTAATGAGTCAGCCCCTGAGCTGCCACAGAGACAC
AATTCTTTGCATAGGAAGACACCAGGGCCTGTCAGAGGCCTAGCACCTCCTCCACCCACCTCGGCCTCCC
CATCTTTACTGAGTAATAGGCCACCTCCCCCAGCCCGAGACCCTCCCAGTCGGGGAGCAGCTCCTCCACC
CCCACCACCTGTGATCCGAAATGGTGCCAGGGATGCTCCCCCTCCCCCACCACCATACCGAATGCATGGG
TCAGAACCCCCGAGCCGAGGAAAGCCCCCACCTCCACCCTCAAGGACGCCAGCTGGGCCACCCCCTCCTC
CTCCACCGCCCCTGAGGAATGGCCACAGAGATTCTATCACCACTGTCCGGTCTTTCTTGGATGATTTTGA
GTCAAAGTATTCCTTCCATCCAGTAGAAGACTTTCCTGCTCCAGAAGAATATAAACACTTTCAGAGGATA
TATCCCAGCAAAACAAACCGAGCTGCCCGTGGAGCCCCACCTCTGCCACCCATTCTCAGGTGA

Translation (440 aa):
MPIPPPPPPPPGPPPPPTFHQANTEQPKLSRDEQRGRGALLQDICKGTKLKKVTNINDRSAPILEKPKGS
SGGYGSGGAALQPKGGLFQGGVLKLRPVGAKDGSENLAGKPALQIPSSRAAAPRPPVSAASGRPQDDTDS
SRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREKPLP
PTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPELPQRH
NSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHG
SEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDFESKYSFHPVEDFPAPEEYKHFQRI
YPSKTNRAARGAPPLPPILR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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