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Report for CCDS11183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11183.1 Public Homo sapiens 17 COPS3 24 110 108 CCDS HistoryNCBI Gene:8533Re-query CCDS DB by CCDS ID:11183.1Re-query CCDS DB by GeneID:8533See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11183.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268717.10 ENSP00000268717.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268717.10Link to Ensembl Protein Viewer:ENSP00000268717.5Re-query CCDS DB by Nucleotide ID:ENST00000268717Re-query CCDS DB by Protein ID:ENSP00000268717
Original member Current member NCBI NM_003653.4 NP_003644.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003653.4Link to Protein Sequence:NP_003644.2Re-query CCDS DB by Nucleotide ID:NM_003653Re-query CCDS DB by Protein ID:NP_003644Link to BLAST:NP_003644.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003644.2 423 Q9UNS2-1 423 100% 0 0

Chromosomal Locations for CCDS 11183.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 17247098 17247151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17247480 17247560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17248926 17249039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17254859 17254945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17260301 17260474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17261966 17262106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17264802 17264981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17267885 17267977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17270758 17270807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17270896 17271008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17276035 17276164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17281132 17281186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGGCGTCTGCCCTGGAGCAGTTCGTGAACAGTGTCCGACAGCTCTCAGCTCAAGGGCAAATGACACAGC
TTTGTGAACTGATCAACAAGAGTGGGGAACTCCTTGCGAAGAACTTATCCCATCTGGACACTGTGCTCGG
GGCTCTGGATGTACAAGAACACTCCTTGGGCGTCCTTGCTGTTTTGTTTGTGAAGTTTTCTATGCCCAGT
GTTCCTGACTTCGAAACGCTATTCTCACAGGTTCAGCTCTTCATCAGCACTTGTAATGGGGAGCACATTC
GATATGCAACAGACACTTTTGCTGGGCTTTGCCATCAGCTAACAAATGCACTTGTGGAAAGAAAACAGCC
CCTGCGAGGAATTGGCATCCTTAAGCAAGCCATAGACAAGATGCAGATGAATACAAACCAGCTGACCTCA
ATACATGCTGATCTCTGCCAGCTTTGTTTGCTAGCAAAATGCTTTAAGCCTGCCCTTCCATATCTTGACG
TGGATATGATGGATATCTGTAAAGAGAATGGAGCCTATGATGCAAAACACTTTTTATGTTACTATTATTA
TGGAGGGATGATCTATACTGGGCTGAAGAACTTTGAAAGAGCTCTCTACTTTTATGAACAGGCTATAACT
ACTCCTGCCATGGCGGTCAGTCATATCATGTTGGAATCATATAAAAAGTATATTTTAGTGTCTTTGATAT
TACTTGGCAAAGTACAACAGCTACCAAAATATACATCTCAAATTGTGGGTAGATTCATTAAGCCTCTTAG
CAATGCATACCACGAGTTAGCACAAGTGTATTCAACCAACAACCCCTCAGAACTCCGAAACCTGGTGAAT
AAGCACAGTGAAACCTTCACTCGCGATAACAACATGGGGCTGGTGAAGCAATGCTTGTCATCTCTTTATA
AGAAGAATATTCAGAGGCTAACAAAGACCTTTTTAACTCTATCATTACAAGATATGGCAAGTCGTGTGCA
GTTGTCTGGACCTCAGGAGGCAGAGAAATACGTTCTGCACATGATAGAAGATGGTGAGATTTTTGCAAGT
ATTAACCAGAAGGACGGTATGGTCAGTTTCCATGATAACCCTGAAAAATATAATAACCCAGCCATGCTTC
ATAACATTGATCAGGAGATGCTGAAGTGCATTGAGCTGGATGAGCGGCTGAAAGCCATGGACCAGGAGAT
CACAGTGAACCCTCAGTTTGTACAAAAGAGTATGGGCTCACAAGAAGATGATTCAGGAAACAAACCATCC
AGTTATTCTTGA

Translation (423 aa):
MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPS
VPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTS
IHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAIT
TPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVN
KHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFAS
INQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDSGNKPS
SYS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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