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Report for CCDS11169.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11169.1 Public Homo sapiens 17 TEKT3 24 110 108 CCDS HistoryNCBI Gene:64518Re-query CCDS DB by CCDS ID:11169.1Re-query CCDS DB by GeneID:64518See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11169.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338696.6 ENSP00000343995.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338696.6Link to Ensembl Protein Viewer:ENSP00000343995.2Re-query CCDS DB by Nucleotide ID:ENST00000338696Re-query CCDS DB by Protein ID:ENSP00000343995
Original member Current member EBI ENST00000395930.6 ENSP00000379263.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395930.6Link to Ensembl Protein Viewer:ENSP00000379263.1Re-query CCDS DB by Nucleotide ID:ENST00000395930Re-query CCDS DB by Protein ID:ENSP00000379263
Original member Current member NCBI NM_031898.3 NP_114104.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031898.3Link to Protein Sequence:NP_114104.1Re-query CCDS DB by Nucleotide ID:NM_031898Re-query CCDS DB by Protein ID:NP_114104Link to BLAST:NP_114104.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114104.1 490 Q9BXF9 490 100% 0 0

Chromosomal Locations for CCDS 11169.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 15303936 15304152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15308664 15308818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15312259 15312481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15314087 15314230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15319077 15319147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15327992 15328075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15331007 15331585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1473 nt):
ATGGAACGTGTAGGTTGTACTTTAACGACAACTTACGCCCACCCTAGACCAACACCAACCAACTTTCTAC
CAGCCATCAGTACCATGGCCTCAAGCTACAGGGACCGCTTTCCCCACTCCAATTTGACCCATAGCCTGAG
CCTTCCTTGGAGACCCAGCACATACTACAAAGTCGCCTCCAATTCCCCAAGCGTGGCCCCGTACTGCACC
AGATCACAGAGGGTGTCCGAGAATACCATGCTTCCCTTTGTTTCCAACAGAACCACTTTCTTCACAAGAT
ACACACCGGATGACTGGTACAGGTCCAATTTAACCAACTATCAAGAGTCCAACACTTCCCGACATAATTC
GGAGAAACTAAGAGTGGATACATCTCGCCTGATTCAAGACAAATATCAACAAACAAGAAAAACTCAGGCA
GACACAACCCAAAATCTGGGAGAACGTGTCAATGACATAGGGTTTTGGAAATCTGAAATCATTCATGAGT
TGGATGAAATGATTGGAGAGACAAATGCACTTACTGATGTGAAGAAAAGACTGGAGCGGGCTTTGATGGA
GACTGAAGCCCCTCTTCAGGTAGCCCGAGAATGTCTATTTCATCGAGAAAAGAGAATGGGAATCGACCTA
GTTCACGATGAAGTTGAAGCACAACTGCTGACGGAAGTTGATACTATTCTGTGTTGTCAAGAAAGAATGA
AGCTACATTTGGATAAGGCTATTGCCCAACTTGCAGCCAACAGAGCGTCCCAGCATGAGCTGGAAAAGGA
CCTGAGTGACAAACAGACGGCTTACCGGATCGACGACAAATGCCACCACCTGCGCAACACATCAGACGGT
GTCGGCTACTTCCGCGGAGTGGAGAGGGTCGATGCAACTGTCTCAGTGCCTGAGTCCTGGGCCAAATTTA
CAGATGACAATATTCTCCGCTCCCAGAGTGAACGGGCAGCTTCCGCTAAGCTAAGAGACGACATTGAAAA
CCTCTTGGTTGTGACTGCCAATGAGATGTGGAATCAATTCAACAAAGTGAACTTGTCTTTCACCAATCGC
ATTGCTGAGACTGCAGATGCTAAGAATAAGATTCAGACGCACTTAGCAAAGACCCTGCAGGAGATTTTCC
AGACTGAAATGACCATAGAATCCATCAAGAAGGCCATCAAGGACAAGACTGCCTTCCTGAAGGTGGCTCA
GACCAGACTGGATGAGCGCACAAGACGGCCGAACATTGAGTTGTGCCGAGACATGGCTCAGCTACGCCTT
GTTAACGAGGTACACGAGGTTGACGACACCATCCAGACCCTGCAGCAGCGCCTGAGGGATGCAGAGGACA
CCCTGCAGTCGCTGGTCCACATCAAAGCCACACTCGAGTATGACCTGGCTGTCAAAGCCAATTCCCTGTA
CATCGACCAGGAAAAATGCATGAGCATGCGCAAGAGCTACCCCAACACCCTCCGGCTGGTCGGCTTCTGC
TAG

Translation (490 aa):
MERVGCTLTTTYAHPRPTPTNFLPAISTMASSYRDRFPHSNLTHSLSLPWRPSTYYKVASNSPSVAPYCT
RSQRVSENTMLPFVSNRTTFFTRYTPDDWYRSNLTNYQESNTSRHNSEKLRVDTSRLIQDKYQQTRKTQA
DTTQNLGERVNDIGFWKSEIIHELDEMIGETNALTDVKKRLERALMETEAPLQVARECLFHREKRMGIDL
VHDEVEAQLLTEVDTILCCQERMKLHLDKAIAQLAANRASQHELEKDLSDKQTAYRIDDKCHHLRNTSDG
VGYFRGVERVDATVSVPESWAKFTDDNILRSQSERAASAKLRDDIENLLVVTANEMWNQFNKVNLSFTNR
IAETADAKNKIQTHLAKTLQEIFQTEMTIESIKKAIKDKTAFLKVAQTRLDERTRRPNIELCRDMAQLRL
VNEVHEVDDTIQTLQQRLRDAEDTLQSLVHIKATLEYDLAVKANSLYIDQEKCMSMRKSYPNTLRLVGFC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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