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Report for CCDS11094.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11094.2 Public Homo sapiens 17 ELP5 24 110 108 CCDS HistoryNCBI Gene:23587Re-query CCDS DB by CCDS ID:11094.2Re-query CCDS DB by GeneID:23587See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 11094.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354429.7 ENSP00000346412.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354429.7Link to Ensembl Protein Viewer:ENSP00000346412.3Re-query CCDS DB by Nucleotide ID:ENST00000354429Re-query CCDS DB by Protein ID:ENSP00000346412
Original member Current member EBI ENST00000396627.7 ENSP00000379868.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396627.7Link to Ensembl Protein Viewer:ENSP00000379868.3Re-query CCDS DB by Nucleotide ID:ENST00000396627Re-query CCDS DB by Protein ID:ENSP00000379868
Original member Current member EBI ENST00000396628.7 ENSP00000379869.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396628.7Link to Ensembl Protein Viewer:ENSP00000379869.3Re-query CCDS DB by Nucleotide ID:ENST00000396628Re-query CCDS DB by Protein ID:ENSP00000379869
Original member Current member NCBI NM_015362.5 NP_056177.4 Accepted alive Link to Nucleotide Sequence:NM_015362.5Link to Protein Sequence:NP_056177.4Re-query CCDS DB by Nucleotide ID:NM_015362Re-query CCDS DB by Protein ID:NP_056177Link to BLAST:NP_056177.4
Original member Current member NCBI NM_203414.3 NP_981959.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203414.3Link to Protein Sequence:NP_981959.2Re-query CCDS DB by Nucleotide ID:NM_203414Re-query CCDS DB by Protein ID:NP_981959Link to BLAST:NP_981959.2
Original member Current member NCBI NM_203415.4 NP_981960.2 Accepted alive Link to Nucleotide Sequence:NM_203415.4Link to Protein Sequence:NP_981960.2Re-query CCDS DB by Nucleotide ID:NM_203415Re-query CCDS DB by Protein ID:NP_981960Link to BLAST:NP_981960.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056177.4 300 Q8TE02-5 300 100% 0 0
NP_981959.2 300 Q8TE02-5 300 100% 0 0
NP_981960.2 300 Q8TE02-5 300 100% 0 0

Chromosomal Locations for CCDS 11094.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7252551 7252596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7252770 7252830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7252918 7252998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7254583 7254803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7256857 7257038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7258588 7258683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7258826 7258926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7259571 7259685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (903 nt):
ATGTTGGACTCGCTGTTGGCCTTGGGCGGCCTGGTGCTGCTTCGGGATTCCGTGGAGTGGGAGGGGCGCA
GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGAAGT
GAGCGAGGAAGAGTTTCGTGAAGGTTTTGACTCTGATATCAACAATCGGCTGGTTTACCATGACTTCTTC
AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCCTTTCCTGGGGGGCCGCTGGGAGCCTTGAGAGCCA
TGTGCAAGAGGACAGATCCTGTTCCTGTCACCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTCGCCT
TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGGTGACAGCTCC
TCAGTGGGGAAAGTGAGTGTGCTGGGCTTGCTACATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCTC
TCAGCAGCCTTGCTCAGACTGAGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTG
TCGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGCCTGGAT
CTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTGGATCCCACAA
CTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAGAGAGAAGCCAGAGATAGCCTGATCCTGCCCTT
CCAGTTCAGTTCTGAAAAACAGCAGGCTCTCCTGCGGCCTAGGCCAGGGCAGGCTACCAGCCACATCTTC
TATGAGCCAGATGCTTATGATGACCTGGACCAAGAAGACCCAGATGACGACCTGGATATTTGA

Translation (300 aa):
MLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILGCEVSEEEFREGFDSDINNRLVYHDFF
RDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVTIALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSS
SVGKVSVLGLLHEELHGPGPVGALSSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLD
LQEGPSVESQPYSDPHIPPVDPTTHLTFNLHLSKKEREARDSLILPFQFSSEKQQALLRPRPGQATSHIF
YEPDAYDDLDQEDPDDDLDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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