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Report for CCDS10974.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10974.1 Public Homo sapiens 16 ACSF3 24 110 108 CCDS HistoryNCBI Gene:197322Re-query CCDS DB by CCDS ID:10974.1Re-query CCDS DB by GeneID:197322See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10974.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317447.9 ENSP00000320646.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000317447.9Link to Ensembl Protein Viewer:ENSP00000320646.4Re-query CCDS DB by Nucleotide ID:ENST00000317447Re-query CCDS DB by Protein ID:ENSP00000320646
Original member Current member EBI ENST00000406948.7 ENSP00000384627.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406948.7Link to Ensembl Protein Viewer:ENSP00000384627.3Re-query CCDS DB by Nucleotide ID:ENST00000406948Re-query CCDS DB by Protein ID:ENSP00000384627
Original member Current member EBI ENST00000614302.5 ENSP00000479130.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614302.5Link to Ensembl Protein Viewer:ENSP00000479130.1Re-query CCDS DB by Nucleotide ID:ENST00000614302Re-query CCDS DB by Protein ID:ENSP00000479130
Original member Current member NCBI NM_001127214.4 NP_001120686.1 Accepted alive Link to Nucleotide Sequence:NM_001127214.4Link to Protein Sequence:NP_001120686.1Re-query CCDS DB by Nucleotide ID:NM_001127214Re-query CCDS DB by Protein ID:NP_001120686Link to BLAST:NP_001120686.1
Original member Current member NCBI NM_001243279.3 NP_001230208.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001243279.3Link to Protein Sequence:NP_001230208.1Re-query CCDS DB by Nucleotide ID:NM_001243279Re-query CCDS DB by Protein ID:NP_001230208Link to BLAST:NP_001230208.1
Original member Current member NCBI NM_174917.5 NP_777577.2 Accepted alive Link to Nucleotide Sequence:NM_174917.5Link to Protein Sequence:NP_777577.2Re-query CCDS DB by Nucleotide ID:NM_174917Re-query CCDS DB by Protein ID:NP_777577Link to BLAST:NP_777577.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120686.1 576 Q4G176 576 100% 0 0
NP_001230208.1 576 Q4G176 576 100% 0 0
NP_777577.2 576 Q4G176 576 100% 0 0

Chromosomal Locations for CCDS 10974.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 89100682 89101347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89102604 89102759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89112092 89112246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89114339 89114487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89120801 89120913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89133136 89133262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89145267 89145401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89145938 89146049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89154090 89154207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1731 nt):
ATGCTGCCCCATGTGGTGCTCACCTTCCGGCGCCTGGGCTGCGCCTTGGCGTCCTGCCGGCTGGCGCCTG
CGAGACACAGAGGAAGTGGTCTTCTGCACACAGCCCCAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTT
CACCCGTGCCCTGGCCTTTGGGGACAGAATCGCCCTGGTTGACCAGCACGGCCGCCACACGTACAGGGAG
CTTTATTCCCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCTCTGCGGGTGTGTCGGCGGGGACCTCC
GGGAGGAGAGGGTCTCCTTCCTATGCGCTAACGATGCCTCCTACGTCGTGGCCCAGTGGGCGTCATGGAT
GAGTGGCGGTGTGGCAGTCCCCCTCTACAGGAAGCATCCCGCGGCCCAGCTGGAGTATGTCATCTGCGAC
TCCCAGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCTCCTGAGCCCGGTGGTCAGGAAGCTGG
GGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACACTGGAGCAGTAGAGGAACCGGCAGAGGTCCCGGT
CCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGGGGAGGCCCAAG
GGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGACCA
AAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTCC
TCTCTGGGTGGGAGCCACCTGTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAAGTTCTTA
AGTTCTGAAACGCCGCGGATCAATGTCTTTATGGCAGTGCCTACAATATACACCAAGCTGATGGAGTACT
ACGACAGGCATTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGCAGTTTGTGAAGAAAAAATTAGGCT
GATGGTCTCAGGCTCAGCTGCCCTGCCCCTCCCAGTGCTGGAGAAGTGGAAGAACATCACGGGCCACACC
CTGCTGGAGCGGTATGGCATGACCGAGATCGGCATGGCTCTGTCCGGGCCCCTGACCACTGCCGTGCGCC
TGCCAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGA
AGCCTGCTCCTACACCATCCACGCAGAGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAA
AAGGAGGGGGAGCTGCTGGTGAGGGGACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTA
AGAGTGCATTCACCCTGGATGGCTGGTTTAAGACAGGGGACACCGTGGTGTTTAAGGATGGCCAGTACTG
GATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGGAG
TGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGATTGGAGTTCCGGATATGACATGGGGCC
AGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGC
CAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAG
ATGGGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGA

Translation (576 aa):
MLPHVVLTFRRLGCALASCRLAPARHRGSGLLHTAPVARSDRSAPVFTRALAFGDRIALVDQHGRHTYRE
LYSRSLRLSQEICRLCGCVGGDLREERVSFLCANDASYVVAQWASWMSGGVAVPLYRKHPAAQLEYVICD
SQSSVVLASQEYLELLSPVVRKLGVPLLPLTPAIYTGAVEEPAEVPVPEQGWRNKGAMIIYTSGTTGRPK
GVLSTHQNIRAVVTGLVHKWAWTKDDVILHVLPLHHVHGVVNALLCPLWVGATCVMMPEFSPQQVWEKFL
SSETPRINVFMAVPTIYTKLMEYYDRHFTQPHAQDFLRAVCEEKIRLMVSGSAALPLPVLEKWKNITGHT
LLERYGMTEIGMALSGPLTTAVRLPGSVGTPLPGVQVRIVSENPQREACSYTIHAEGDERGTKVTPGFEE
KEGELLVRGPSVFREYWNKPEETKSAFTLDGWFKTGDTVVFKDGQYWIRGRTSVDIIKTGGYKVSALEVE
WHLLAHPSITDVAVIGVPDMTWGQRVTAVVTLREGHSLSHRELKEWARNVLAPYAVPSELVLVEEIPRNQ
MGKIDKKALIRHFHPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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