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Report for CCDS10967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10967.1 Public Homo sapiens 16 ZC3H18 24 110 108 CCDS HistoryNCBI Gene:124245Re-query CCDS DB by CCDS ID:10967.1Re-query CCDS DB by GeneID:124245See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10967.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301011.10 ENSP00000301011.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301011.10Link to Ensembl Protein Viewer:ENSP00000301011.5Re-query CCDS DB by Nucleotide ID:ENST00000301011Re-query CCDS DB by Protein ID:ENSP00000301011
Original member Current member NCBI NM_144604.4 NP_653205.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144604.4Link to Protein Sequence:NP_653205.3Re-query CCDS DB by Nucleotide ID:NM_144604Re-query CCDS DB by Protein ID:NP_653205Link to BLAST:NP_653205.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653205.3 953 Q86VM9 953 100% 0 0

Chromosomal Locations for CCDS 10967.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 88577124 88577726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88586600 88586684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88598178 88598326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88598620 88598712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88599791 88599948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88608934 88609051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88611268 88611536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88622197 88622388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88623219 88623344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88623958 88624062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88624602 88624745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88625202 88625267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88627622 88627782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88627920 88628119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88628758 88628854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88630485 88630581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88631101 88631299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2862 nt):
ATGGATGTGGCCGAGAGCCCTGAACGGGATCCTCACTCTCCAGAGGATGAAGAGCAGCCACAGGGACTCT
CGGACGATGACATTCTGAGGGACAGCGGGTCCGATCAGGATTTGGACGGGGCGGGGGTGAGGGCTTCTGA
TCTGGAGGATGAGGAAAGTGCAGCCAGGGGGCCGAGCCAGGAGGAGGAAGATAATCACTCCGACGAGGAG
GACCGGGCAAGTGAGCCTAAATCCCAAGACCAGGACTCAGAGGTGAATGAGCTGAGCCGGGGCCCGACCA
GCTCCCCCTGCGAGGAGGAGGGGGACGAAGGGGAGGAAGACCGGACAAGCGACCTTAGGGATGAGGCCTC
CTCAGTCACCAGGGAGCTGGATGAGCATGAGCTAGACTACGATGAGGAGGTTCCTGAGGAGCCAGCTCCC
GCCGTCCAGGAGGACGAGGCTGAGAAAGCGGGGGCTGAGGATGATGAGGAGAAAGGCGAAGGCACTCCCA
GGGAGGAGGGGAAGGCTGGTGTTCAGAGTGTGGGAGAAAAGGAATCCCTGGAGGCTGCCAAGGAGAAAAA
GAAAGAGGACGATGATGGAGAAATCGATGATGGGGAAATAGACGATGATGACCTGGAAGAAGGTGAAGTG
AAGGACCCCAGTGACAGGAAGGTGAGGCCTCGTCCCACCTGCCGGTTCTTCATGAAAGGGAACTGTACCT
GGGGAATGAATTGTAGGTTTATACACCCTGGAGTGAACGACAAGGGGAACTACTCCCTAATCACCAAAGC
CGACCCCTTCCCGCCTAATGGTGCCCCGCCTCTCGGACCTCACCCGCTGATGCCCGCCAACCCTTGGGGT
GGGCCGGTAGTTGATGAAATTTTGCCTCCACCCCCTCCAGAGCCCCCAACAGAGAGTGCCTGGGAACGAG
GACTCCGGCATGCAAAGGAGGTTTTAAAAAAAGCAACTATTCGAAAAGAACAGGAGCCTGATTTTGAAGA
GAAAAGGTTTACGGTGACCATTGGCGAAGACGAACGGGAATTTGACAAAGAAAATGAAGTTTTTCGAGAT
TGGAATTCTCGGATCCCGAGAGATGTCAGAGACACAGTACTCGAGCCTTACGCAGACCCTTATTATGACT
ATGAAATTGAGCGGTTTTGGCGTGGCGGACAGTATGAGAATTTCAGGGTGCAGTATACAGAAACAGAGCC
GTATCATAATTACCGAGAAAGGGAGCGGGAGCGAGAGAGAGAGAACAGACAGCGCGAGCGCGAGCGGGAG
CGGGAGCGGGACCGAGAGCGGGAGCGCCGGCAGAGGGAGCGCGAGCGAGAGCGGGAGCGCGAGCGCGACA
AGGAGCGGCAGCGGAGGAAGGAGGAGTGGGAGCGTGAGCGAGCCAAGCGGGACGAGAAGGACCGGCAGCA
CCGTGACCGCGACCGGGAGAAGGAGCGGGAGAAGGAGAAGGGGAAGCCCAAGCCCCGCTCCCCGCAGCCG
CCAAGCCGCCAAGCTGAGCCACCAAAGAAGGAGGCTGCCACCACGGGGCCGCAGGTGAAGAGAGCAGATG
AGTGGAAGGACCCTTGGCGCCGATCCAAGTCTCCCAAGAAGAAACTCGGGGTGTCGGTCTCCCCGAGCCG
GGCTCGAAGGCGTCGGAAAACATCAGCCTCGTCAGCCTCTGCCTCTAATTCCTCCAGGTCGTCTTCGCGG
TCATCGTCCTACTCTGGCTCCGGCTCCTCCCGGTCGCGATCCCGGTCTTCATCCTACAGCTCCTACTCCA
GCCGCTCTTCCAGACACAGCTCGTTCTCAGGAAGCCGGTCCAGGTCCCGGTCCTTCTCTTCGTCCCCGTC
CCCGTCCCCAACACCTTCCCCACATAGACCTTCCATCAGAACCAAGGGAGAGCCGGCCCCGCCGCCCGGG
AAAGCAGGAGAGAAGTCAGTGAAGAAGCCGGCCCCGCCTCCAGCCCCACCACAGGCCACCAAAACCACTG
CTCCTGTCCCCGAGCCCACCAAGCCAGGAGACCCTCGGGAAGCCAGGAGGAAGGAGCGGCCAGCCAGGAC
CCCCCCCAGGAGGCGGACGCTAAGCGGCAGCGGCAGTGGCAGTGGTAGCAGCTATAGTGGTTCCAGCTCC
CGATCCAGGTCCCTGAGCGTGAGCAGCGTCTCCTCAGTGTCCAGTGCTACGTCGAGCAGCAGCTCTGCAC
ACAGCGTGGACTCGGAGGACATGTACGCAGACCTGGCTAGCCCCGTGTCCTCAGCCAGCTCTCGGTCCCC
GGCCCCAGCCCAGACCAGGAAGGAGAAAGGAAAATCTAAGAAAGAAGACGGTGTTAAAGAGGAAAAGCGG
AAAAGGGATTCGTCCACACAACCACCCAAATCTGCAAAACCTCCAGCAGGGGGGAAGTCCTCCCAGCAGC
CCTCGACACCCCAGCAGGCACCCCCCGGGCAGCCCCAGCAGGGCACATTTGTGGCCCACAAGGAGATCAA
GTTGACACTGTTGAATAAGGCGGCTGATAAAGGAAGCAGGAAGCGCTATGAACCATCAGACAAGGACAGG
CAGAGCCCTCCTCCAGCCAAGCGGCCCAACACATCCCCAGACCGAGGTTCTCGGGACCGGAAGTCAGGTG
GGAGACTGGGCTCCCCGAAGCCAGAGCGGCAGAGAGGCCAGAACTCCAAAGCCCCTGCAGCCCCGGCTGA
CAGGAAGCGCCAGCTGTCACCCCAGTCCAAGAGCTCCAGCAAGGTCACGAGCGTGCCCGGCAAAGCCTCG
GATCCCGGCGCCGCCAGCACCAAATCAGGGAAGGCCAGCACGCTGTCTCGGCGGGAGGAGCTGCTGAAAC
AGCTGAAGGCCGTGGAGGATGCTATTGCACGCAAGCGGGCCAAGATCCCCGGGAAAGCATAG

Translation (953 aa):
MDVAESPERDPHSPEDEEQPQGLSDDDILRDSGSDQDLDGAGVRASDLEDEESAARGPSQEEEDNHSDEE
DRASEPKSQDQDSEVNELSRGPTSSPCEEEGDEGEEDRTSDLRDEASSVTRELDEHELDYDEEVPEEPAP
AVQEDEAEKAGAEDDEEKGEGTPREEGKAGVQSVGEKESLEAAKEKKKEDDDGEIDDGEIDDDDLEEGEV
KDPSDRKVRPRPTCRFFMKGNCTWGMNCRFIHPGVNDKGNYSLITKADPFPPNGAPPLGPHPLMPANPWG
GPVVDEILPPPPPEPPTESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFTVTIGEDEREFDKENEVFRD
WNSRIPRDVRDTVLEPYADPYYDYEIERFWRGGQYENFRVQYTETEPYHNYRERERERERENRQRERERE
RERDRERERRQRERERERERERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKEKGKPKPRSPQP
PSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSASASNSSRSSSR
SSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPG
KAGEKSVKKPAPPPAPPQATKTTAPVPEPTKPGDPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSS
RSRSLSVSSVSSVSSATSSSSSAHSVDSEDMYADLASPVSSASSRSPAPAQTRKEKGKSKKEDGVKEEKR
KRDSSTQPPKSAKPPAGGKSSQQPSTPQQAPPGQPQQGTFVAHKEIKLTLLNKAADKGSRKRYEPSDKDR
QSPPPAKRPNTSPDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLSPQSKSSSKVTSVPGKAS
DPGAASTKSGKASTLSRREELLKQLKAVEDAIARKRAKIPGKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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