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Report for CCDS10961.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10961.2 Public Homo sapiens 16 ZCCHC14 24 110 108 CCDS HistoryNCBI Gene:23174Re-query CCDS DB by CCDS ID:10961.2Re-query CCDS DB by GeneID:23174See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10961.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000671377.2 ENSP00000499622.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000671377.2Link to Ensembl Protein Viewer:ENSP00000499622.1Re-query CCDS DB by Nucleotide ID:ENST00000671377Re-query CCDS DB by Protein ID:ENSP00000499622
Original member Current member NCBI NM_015144.3 NP_055959.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015144.3Link to Protein Sequence:NP_055959.2Re-query CCDS DB by Nucleotide ID:NM_015144Re-query CCDS DB by Protein ID:NP_055959Link to BLAST:NP_055959.2

Chromosomal Locations for CCDS 10961.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 87410280 87410335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87411516 87412976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87413055 87413195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87414414 87414541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87415276 87415367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87417460 87417742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87418847 87418901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87419783 87419877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87420607 87420716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87423810 87423881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87433128 87433201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87460008 87460131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87491669 87492238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3261 nt):
ATGGTGGAGAAGCGCTGCCCGCTGCAGAGGGACGGCGTGTACCGCTGGTTCTCGGAGCTGCCGTCGCCGC
AGCGCGTGGAGTTCCTGTGCGGCCTGCTGGACCTGTGCATCCCGCTCGAGCTTCGCTTCCTCGGCTCGTG
CCTGGAGGACCTGGCCCGCAAGGACTACCACTCGCTGCGCGACTCGGAGATCAAGGCCAACAACCCGGCC
GACCTGGGCAGCCTCACCAACCTGACGGACGAGGTGGTGCGCAGCAAGCTGCTGGTGTCGCTGGCGCTGC
TGGGCTCGGAGCAGCGCGAGGCGGCGGGCGTGCTCTACCGCACGCTCACGCACATCGACTCCATCATCCA
CAACTACGGGCTGCAGCTTAACGAGGGCCGCACGGGCGATGAGTTCCTGCTGCTGTTCACCATGGCCTCC
AACCACCCGGCCTTCAGCTTCCACCAGAAGCAGGTGCTGCGCCAGGAGCTCACGCAGATCCAGAGCAGCC
TGAACGGCGGCGGGGGCCACGGCGGCAAGGGCGCGCCCGGGCCGGGCGGCGCGCTGCCCACTTGCCCAGC
CTGCCACAAGATCACTCCAAGAACTGAGGCCCCTGTCAGCAGTGTCAGTAATAGTTTGGAGAATGCCCTG
CACACATCAGCACATTCCACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAAAACACAGCAAAGTGAGTG
TTGAAAAGATAGACCTGAAGGGATTATCACACACAAAAAATGACAGAAATGTTGAATGTTCCTTTGAGGT
CTTGTGGTCTGATTCTTCAATAACATCAGTAACCAAATCTTCCTCTGAAGTGACGGAATTTATTTCAAAG
CTATGTCAGCTCTATCCTGAAGAGAACTTGGAGAAACTCATTCCTTGCTTAGCTGGTCCGGACGCATTTT
ATGTGGAGCGAAACCACGTGGATCTGGACTCAGGCCTGAGGTACCTGGCCTCATTACCTTCTCACGTGTT
GAAAAATGACCATGTCAGGAGGTTTCTCAGCACTTCCTCTCCCCCACAGCAGCTTCAGAGTCCAAGTCCT
GGCAATCCCTCCCTTTCTAAAGTAGGTACCGTGATGGGCGTGTCTGGAAGGCCTGTGTGTGGAGTGGCTG
GTATCCCGTCCTCGCAGAGCGGAGCCCAGCACCACGGGCAGCACCCGGCCGGCTCCGCCGCCCCCTTGCC
TCACTGCTCCCATGCGGGCAGCGCGGGCTCAGCCCTGGCCTACCGGACCCAGATGGACACATCACCTGCC
ATCCTCATGCCTTCCAGTCTGCAGACCCCTCAGACCCAGGAGCAGAATGGGATTCTAGACTGGCTTAGGA
AACTGCGTTTGCACAAGTATTACCCCGTCTTTAAGCAGCTCTCCATGGAGAAGTTTTTGAGCCTTACTGA
AGAAGATCTGAATAAATTTGAGTCTCTTACCATGGGGGCAAAGAAGAAGCTCAAGACCCAGCTGGAGCTG
GAAAAGGAGAAGTCAGAGAGACGGTGCCTGAACCCCTCGGCCCCGCCGCTGGTCACCAGCAGTGGTGTGG
CTCGAGTGCCCCCCACCAGCCACGTCGGGCCCGTGCAGTCGGGGCGGGGCAGCCATGCAGCAGAGCTGCG
GGTGGAAGTGGAGCAGCCCCATCACCAGCTGCCCCGGGAAGGCAGTTCCTCGGAGTACTCCAGCTCCTCC
TCCAGCCCCATGGGGGTACAGGCCCGGGAAGAGAGCTCCGACAGCGCTGAGGAGAATGACAGACGTGTGG
AGATTCACTTGGAGAGCTCTGACAAGGAGAAGCCGGTGATGCTGCTGAATCACTTCACTTCCAGTTCCGC
CAGACCCACGGCCCAGGTTCTCCCTGTGCAGAATGAGGCCAGCTCCAATCCATCAGGCCACCACCCCCTG
CCCCCGCAGATGCTGAGCGCAGCCTCACACATCACACCCATCCGCATGCTGAATTCCGTGCACAAGCCGG
AAAGAGGGAGCGCGGACATGAAGCTCCTCTCGTCTTCTGTGCACTCACTTTTGTCTCTAGAAGAAAGGAA
TAAAGGATCTGGACCAAGAAGCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTG
CCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCA
CAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACA
GCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCGCC
CGTCCGCCCATCAAACTGCTGCTGTCGTCATCTGTTCCTGCTGATTCTGCCATTTCTGGGCAAACTTCCT
GTCCTAATAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGACTGCTCTGTACACAGCCAA
CACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCAGTGGGCCCCCTGCAGGGTGGCTTCTGTGCAAAC
AGCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGTCCTTTGCCAACATGGCCACGTTGCCCAGCTGCC
CAGCCCCCAGCTCCAGCCCGGCGCTGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGG
CGGCTCCACAGGAAACATTCCTGCCTCGAATCCGAACCACCACCACCACCACCACCATCAGCAGCCCCCG
GCACCCCCGCAGCCCGCCCCACCCCCGCCAGGCTGCATTGTGTGCACGTCCTGTGGCTGCAGCGGCAGCT
GCGGCTCGAGTGGCCTGACTGTCAGCTACGCCAACTACTTCCAGCACCCGTTCTCCGGTCCGTCCGTGTT
CACCTTCCCCTTCTTGCCCTTCAGTCCCATGTGCAGCAGCGGCTACGTCAGCGCCCAGCAGTACGGCGGC
GGCTCCACCTTCCCCGTCGTGCACGCCCCTTACAGCAGCAGCGGGACCCCAGACCCTGTCCTGAGTGGGC
AGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGG
ACTGGTGGGCAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAACCTATCTTGTTACAACTGCGGGGCC
ACTGGTCACCGCGCCCAGGACTGCAAACAGCCGTCCATGGACTTCAACCGGCCAGGTACTTTTAGGTTGA
AATACGCCCCTCCAGCAGAAAGTCTGGACTCCACAGATTGA

Translation (1086 aa):
MVEKRCPLQRDGVYRWFSELPSPQRVEFLCGLLDLCIPLELRFLGSCLEDLARKDYHSLRDSEIKANNPA
DLGSLTNLTDEVVRSKLLVSLALLGSEQREAAGVLYRTLTHIDSIIHNYGLQLNEGRTGDEFLLLFTMAS
NHPAFSFHQKQVLRQELTQIQSSLNGGGGHGGKGAPGPGGALPTCPACHKITPRTEAPVSSVSNSLENAL
HTSAHSTEESLPKRPLGKHSKVSVEKIDLKGLSHTKNDRNVECSFEVLWSDSSITSVTKSSSEVTEFISK
LCQLYPEENLEKLIPCLAGPDAFYVERNHVDLDSGLRYLASLPSHVLKNDHVRRFLSTSSPPQQLQSPSP
GNPSLSKVGTVMGVSGRPVCGVAGIPSSQSGAQHHGQHPAGSAAPLPHCSHAGSAGSALAYRTQMDTSPA
ILMPSSLQTPQTQEQNGILDWLRKLRLHKYYPVFKQLSMEKFLSLTEEDLNKFESLTMGAKKKLKTQLEL
EKEKSERRCLNPSAPPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSS
SSPMGVQAREESSDSAEENDRRVEIHLESSDKEKPVMLLNHFTSSSARPTAQVLPVQNEASSNPSGHHPL
PPQMLSAASHITPIRMLNSVHKPERGSADMKLLSSSVHSLLSLEERNKGSGPRSSMKVDKSFGSAMMDVL
PASAPHQPVQVLSGLSESSSMSPTVSFGPRTKVVHASTLDRVLKTAQQPALVVETSTAATGTPSTVLHAA
RPPIKLLLSSSVPADSAISGQTSCPNNVQISVPPAIINPRTALYTANTKVAFSAMSSMPVGPLQGGFCAN
SNTASPSSHPSTSFANMATLPSCPAPSSSPALSSVPESSFYSSSGGGGSTGNIPASNPNHHHHHHHQQPP
APPQPAPPPPGCIVCTSCGCSGSCGSSGLTVSYANYFQHPFSGPSVFTFPFLPFSPMCSSGYVSAQQYGG
GSTFPVVHAPYSSSGTPDPVLSGQSTFAVPPMQNFMAGTAGVYQTQGLVGSSNGSSHKKSGNLSCYNCGA
TGHRAQDCKQPSMDFNRPGTFRLKYAPPAESLDSTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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