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Report for CCDS10675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10675.1 Public Homo sapiens 16 CD2BP2 24 110 108 CCDS HistoryNCBI Gene:10421Re-query CCDS DB by CCDS ID:10675.1Re-query CCDS DB by GeneID:10421See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10675.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305596.8 ENSP00000304903.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305596.8Link to Ensembl Protein Viewer:ENSP00000304903.3Re-query CCDS DB by Nucleotide ID:ENST00000305596Re-query CCDS DB by Protein ID:ENSP00000304903
Original member Current member EBI ENST00000569466.1 ENSP00000456935.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569466.1Link to Ensembl Protein Viewer:ENSP00000456935.1Re-query CCDS DB by Nucleotide ID:ENST00000569466Re-query CCDS DB by Protein ID:ENSP00000456935
Original member Current member NCBI NM_001243646.2 NP_001230575.1 Accepted alive Link to Nucleotide Sequence:NM_001243646.2Link to Protein Sequence:NP_001230575.1Re-query CCDS DB by Nucleotide ID:NM_001243646Re-query CCDS DB by Protein ID:NP_001230575Link to BLAST:NP_001230575.1
Original member Current member NCBI NM_006110.3 NP_006101.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006110.3Link to Protein Sequence:NP_006101.1Re-query CCDS DB by Nucleotide ID:NM_006110Re-query CCDS DB by Protein ID:NP_006101Link to BLAST:NP_006101.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230575.1 341 O95400 341 100% 0 0
NP_006101.1 341 O95400 341 100% 0 0

Chromosomal Locations for CCDS 10675.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30352985 30353095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30353181 30353287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30353368 30353800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30353901 30354058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30354184 30354322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30354604 30354681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGCCAAAGAGGAAAGTGACCTTCCAAGGCGTGGGAGATGAGGAGGATGAGGATGAAATCATTGTCCCCA
AGAAGAAGCTGGTGGACCCTGTGGCTGGGTCAGGGGGTCCTGGGAGCCGCTTTAAAGGCAAACACTCTTT
GGATAGCGATGAGGAGGAGGATGATGATGATGGGGGGTCCAGCAAATATGACATCTTGGCCTCAGAGGAT
GTAGAAGGTCAGGAGGCAGCCACACTCCCCAGCGAGGGGGGTGTTCGGATCACACCCTTTAACCTGCAGG
AGGAGATGGAGGAAGGCCACTTTGATGCCGATGGCAACTACTTCCTGAACCGGGATGCTCAGATCCGAGA
CAGCTGGCTGGACAACATTGACTGGGTGAAGATCCGGGAGCGGCCACCTGGCCAGCGCCAGGCCTCAGAC
TCGGAGGAGGAGGACAGCTTGGGCCAGACCTCAATGAGTGCCCAAGCCCTCTTGGAGGGACTTTTGGAGC
TCCTATTGCCTAGAGAGACAGTGGCTGGGGCACTGAGGCGTCTGGGGGCCCGAGGAGGAGGCAAAGGGAG
AAAGGGGCCTGGGCAACCCAGTTCCCCTCAGCGCCTGGACCGGCTCTCCGGGTTGGCCGACCAGATGGTG
GCCCGGGGCAACCTTGGTGTGTACCAGGAAACAAGGGAACGGTTGGCTATGCGTCTGAAGGGTTTGGGGT
GTCAGACCCTAGGACCCCACAATCCCACACCCCCACCCTCCCTGGACATGTTCGCTGAGGAGTTGGCGGA
GGAGGAACTGGAGACCCCAACCCCTACCCAGAGAGGAGAAGCAGAGTCGCGGGGAGATGGTCTGGTGGAT
GTGATGTGGGAATATAAGTGGGAGAACACGGGGGATGCCGAGCTGTATGGGCCCTTCACCAGCGCCCAGA
TGCAGACCTGGGTGAGTGAAGGCTACTTCCCGGACGGTGTTTATTGCCGGAAGCTGGACCCCCCTGGTGG
TCAGTTCTACAACTCCAAACGCATTGACTTTGACCTCTACACCTGA

Translation (341 aa):
MPKRKVTFQGVGDEEDEDEIIVPKKKLVDPVAGSGGPGSRFKGKHSLDSDEEEDDDDGGSSKYDILASED
VEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNRDAQIRDSWLDNIDWVKIRERPPGQRQASD
SEEEDSLGQTSMSAQALLEGLLELLLPRETVAGALRRLGARGGGKGRKGPGQPSSPQRLDRLSGLADQMV
ARGNLGVYQETRERLAMRLKGLGCQTLGPHNPTPPPSLDMFAEELAEEELETPTPTQRGEAESRGDGLVD
VMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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