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Report for CCDS10573.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10573.1 Public Homo sapiens 16 TMC7 24 110 108 CCDS HistoryNCBI Gene:79905Re-query CCDS DB by CCDS ID:10573.1Re-query CCDS DB by GeneID:79905See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10573.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304381.10 ENSP00000304710.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304381.10Link to Ensembl Protein Viewer:ENSP00000304710.5Re-query CCDS DB by Nucleotide ID:ENST00000304381Re-query CCDS DB by Protein ID:ENSP00000304710
Original member Current member NCBI NM_024847.4 NP_079123.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024847.4Link to Protein Sequence:NP_079123.3Re-query CCDS DB by Nucleotide ID:NM_024847Re-query CCDS DB by Protein ID:NP_079123Link to BLAST:NP_079123.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079123.3 723 Q7Z402-1 723 100% 0 0

Chromosomal Locations for CCDS 10573.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 18984064 18984130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19009172 19009415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19016450 19016598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19021629 19021796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19023113 19023195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19030224 19030369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19035676 19035823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19037874 19038047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19040289 19040446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19044884 19045001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19045341 19045438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19047063 19047249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19051686 19051816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19056542 19056697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19059416 19059494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19061778 19061843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2172 nt):
ATGAGCGAGTCCAGCGGCAGTGCGCTCCAGCCCGGCAGGCCCAGCCGGCAGCCGGCGGTCCATCCAGAGA
ACCTCTCTCTAGACTCCAGTTGCTTCTCTTCTCCACCTGTGAACTTCCTCCAAGAATTGCCAAGCTACCG
GTCCATTGCACGTAGGAGAACGACTGTCCATTCCCGGGACAAGCAAAGCGGAACTTTGCTAAAGCCAACC
GACTCTTACAGCTCCCAGCTGGAGGACAGAATCGCTGAAAACCTCAGCAGCCATTCTCTTCGAAATTATG
CACTGAACATCTCTGAGAAGCGGAGACTAAGGGACATTCAAGAGACACAAATGAAGTATCTCTCCGAATG
GGACCAGTGGAAGCGGTATAGCAGCAAGTCTTGGAAGAGGTTCCTAGAGAAGGCTCGAGAGATGACGACC
CACCTGGAGCTGTGGCGGGAGGACATCCGCAGCATAGAAGGGAAATTTGGCACTGGGATTCAGTCCTATT
TCTCCTTCTTGAGATTCCTGGTGTTGCTGAATTTGGTGATATTTCTGATCATCTTTATGCTGGTTTTGCT
CCCAGTCTTACTCACGAAATACAAGATCACCAACAGCAGCTTCGTGCTCATTCCTTTCAAAGACATGGAT
AAACAATGTACAGTCTATCCAGTAAGCAGTTCTGGACTCATTTACTTTTACAGTTATATCATAGACTTGC
TTTCTGGCACTGGTTTCCTGGAGGAAACTAGCCTCTTTTACGGACATTACACCATTGATGGGGTGAAATT
TCAGAACTTCACCTATGATCTGCCCCTGGCGTATTTGTTAAGCACAATCGCCTCCCTGGCCCTGAGCCTT
CTTTGGATAGTGAAAAGGTCGGTGGAAGGATTCAAAATCAACCTGATTCGGAGTGAGGAGCACTTTCAGA
GTTACTGCAACAAGATATTTGCCGGCTGGGACTTCTGCATCACTAACCGCAGCATGGCGGATCTGAAGCA
CAGCAGCTTGCGGTACGAGCTCCGAGCAGATCTGGAGGAAGAAAGAATGCGGCAGAAAATAGCAGAAAGG
ACCTCAGAAGAAACAATACGCATTTACTCTTTGAGACTGTTTTTGAACTGTATTGTTCTGGCTGTTTTAG
GGGCATGCTTTTATGCAATATACGTAGCAACTGTCTTCTCGCAAGAGCACATGAAAAAGGAAATCGACAA
GATGGTTTTTGGAGAGAACCTCTTCATATTGTATCTACCGTCTATTGTGATCACGCTGGCCAATTTTATC
ACCCCAATGATCTTTGCCAAGATCATCCGCTATGAGGATTATTCTCCAGGCTTTGAGATCCGTCTGACAA
TCCTTAGGTGTGTCTTTATGCGGCTGGCCACCATATGTGTCCTGGTGTTCACGCTGGGCTCCAAGATCAC
ATCCTGTGATGATGACACATGTGACCTTTGCGGCTACAACCAGAAACTCTACCCGTGCTGGGAGACCCAA
GTTGGGCAGGAAATGTACAAGCTGATGATCTTCGACTTCATCATCATCTTGGCTGTGACACTCTTCGTGG
ATTTTCCTAGAAAGCTCCTGGTGACCTACTGTTCCTCTTGCAAGCTGATTCAGTGCTGGGGGCAGCAGGA
GTTTGCCATTCCTGATAACGTCCTGGGGATAGTTTACGGGCAAACCATCTGCTGGATCGGAGCCTTTTTC
TCACCCCTTCTCCCTGCAATTGCAACCCTGAAATTCATTATCATCTTCTATGTGAAAGAGTGGAGTCTGC
TTTACACCTGCAGACCCTCCCCCAGGCCGTTCAGAGCATCCAATTCTAATTTCTTCTTCCTGTTGGTGTT
GTTGATCGGGCTGTGTTTGGCAATAATACCTCTGACAATCAGCATATCACGCATCCCTTCCTCGAAAGCC
TGTGGGCCGTTCACCAACTTCAACACCACCTGGGAGGTCATCCCCAAGACGGTGAGCACCTTCCCCAGCT
CGCTGCAGTCCTTCATCCATGGTGTCACATCCGAAGCCTTTGCAGTTCCTTTCTTCATGATTATTTGCCT
CATCATGTTTTACTTCATTGCCTTAGCTGGAGCACACAAACGGGTGGTCATCCAGCTCCGAGAGCAGCTA
TCCCTGGAAAGTCGTGACAAGTGCTACCTAATCCAGAAACTAACAGAAGCCCAAAGGGACATGAGGAACT
AA

Translation (723 aa):
MSESSGSALQPGRPSRQPAVHPENLSLDSSCFSSPPVNFLQELPSYRSIARRRTTVHSRDKQSGTLLKPT
DSYSSQLEDRIAENLSSHSLRNYALNISEKRRLRDIQETQMKYLSEWDQWKRYSSKSWKRFLEKAREMTT
HLELWREDIRSIEGKFGTGIQSYFSFLRFLVLLNLVIFLIIFMLVLLPVLLTKYKITNSSFVLIPFKDMD
KQCTVYPVSSSGLIYFYSYIIDLLSGTGFLEETSLFYGHYTIDGVKFQNFTYDLPLAYLLSTIASLALSL
LWIVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHSSLRYELRADLEEERMRQKIAER
TSEETIRIYSLRLFLNCIVLAVLGACFYAIYVATVFSQEHMKKEIDKMVFGENLFILYLPSIVITLANFI
TPMIFAKIIRYEDYSPGFEIRLTILRCVFMRLATICVLVFTLGSKITSCDDDTCDLCGYNQKLYPCWETQ
VGQEMYKLMIFDFIIILAVTLFVDFPRKLLVTYCSSCKLIQCWGQQEFAIPDNVLGIVYGQTICWIGAFF
SPLLPAIATLKFIIIFYVKEWSLLYTCRPSPRPFRASNSNFFFLLVLLIGLCLAIIPLTISISRIPSSKA
CGPFTNFNTTWEVIPKTVSTFPSSLQSFIHGVTSEAFAVPFFMIICLIMFYFIALAGAHKRVVIQLREQL
SLESRDKCYLIQKLTEAQRDMRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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