NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10507.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10507.1 Public Homo sapiens 16 DNASE1 24 110 108 CCDS HistoryNCBI Gene:1773Re-query CCDS DB by CCDS ID:10507.1Re-query CCDS DB by GeneID:1773See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10507.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000246949.10 ENSP00000246949.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000246949.10Link to Ensembl Protein Viewer:ENSP00000246949.5Re-query CCDS DB by Nucleotide ID:ENST00000246949Re-query CCDS DB by Protein ID:ENSP00000246949
Original member Current member EBI ENST00000407479.5 ENSP00000385905.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407479.5Link to Ensembl Protein Viewer:ENSP00000385905.1Re-query CCDS DB by Nucleotide ID:ENST00000407479Re-query CCDS DB by Protein ID:ENSP00000385905
Original member Current member NCBI NM_001351825.2 NP_001338754.1 Accepted alive Link to Nucleotide Sequence:NM_001351825.2Link to Protein Sequence:NP_001338754.1Re-query CCDS DB by Nucleotide ID:NM_001351825Re-query CCDS DB by Protein ID:NP_001338754Link to BLAST:NP_001338754.1
Original member Current member NCBI NM_001387135.1 NP_001374064.1 Accepted alive Link to Nucleotide Sequence:NM_001387135.1Link to Protein Sequence:NP_001374064.1Re-query CCDS DB by Nucleotide ID:NM_001387135Re-query CCDS DB by Protein ID:NP_001374064Link to BLAST:NP_001374064.1
Original member Current member NCBI NM_005223.4 NP_005214.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005223.4Link to Protein Sequence:NP_005214.2Re-query CCDS DB by Nucleotide ID:NM_005223Re-query CCDS DB by Protein ID:NP_005214Link to BLAST:NP_005214.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338754.1 282 P24855-1 282 100% 0 0
NP_001374064.1 282 P24855-1 282 100% 0 0
NP_005214.2 282 P24855-1 282 100% 0 0

Chromosomal Locations for CCDS 10507.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3655374 3655520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3655849 3655937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3656102 3656185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3656638 3656753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3656999 3657111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3657187 3657341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3657720 3657816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3657906 3657953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGAGGGGCATGAAGCTGCTGGGGGCGCTGCTGGCACTGGCGGCCCTACTGCAGGGGGCCGTGTCCCTGA
AGATCGCAGCCTTCAACATCCAGACATTTGGGGAGACCAAGATGTCCAATGCCACCCTCGTCAGCTACAT
TGTGCAGATCCTGAGCCGCTATGACATCGCCCTGGTCCAGGAGGTCAGAGACAGCCACCTGACTGCCGTG
GGGAAGCTGCTGGACAACCTCAATCAGGATGCACCAGACACCTATCACTACGTGGTCAGTGAGCCACTGG
GACGGAACAGCTATAAGGAGCGCTACCTGTTCGTGTACAGGCCTGACCAGGTGTCTGCGGTGGACAGCTA
CTACTACGATGATGGCTGCGAGCCCTGCGGGAACGACACCTTCAACCGAGAGCCAGCCATTGTCAGGTTC
TTCTCCCGGTTCACAGAGGTCAGGGAGTTTGCCATTGTTCCCCTGCATGCGGCCCCGGGGGACGCAGTAG
CCGAGATCGACGCTCTCTATGACGTCTACCTGGATGTCCAAGAGAAATGGGGCTTGGAGGACGTCATGTT
GATGGGCGACTTCAATGCGGGCTGCAGCTATGTGAGACCCTCCCAGTGGTCATCCATCCGCCTGTGGACA
AGCCCCACCTTCCAGTGGCTGATCCCCGACAGCGCTGACACCACAGCTACACCCACGCACTGTGCCTATG
ACAGGATCGTGGTTGCAGGGATGCTGCTCCGAGGCGCCGTTGTTCCCGACTCGGCTCTTCCCTTTAACTT
CCAGGCTGCCTATGGCCTGAGTGACCAACTGGCCCAAGCCATCAGTGACCACTATCCAGTGGAGGTGATG
CTGAAGTGA

Translation (282 aa):
MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQEVRDSHLTAV
GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDTFNREPAIVRF
FSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKWGLEDVMLMGDFNAGCSYVRPSQWSSIRLWT
SPTFQWLIPDSADTTATPTHCAYDRIVVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVM
LK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH