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Report for CCDS10463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10463.1 Public Homo sapiens 16 BRICD5 24 110 108 CCDS HistoryNCBI Gene:283870Re-query CCDS DB by CCDS ID:10463.1Re-query CCDS DB by GeneID:283870See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10463.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328540.8 ENSP00000332389.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328540.8Link to Ensembl Protein Viewer:ENSP00000332389.3Re-query CCDS DB by Nucleotide ID:ENST00000328540Re-query CCDS DB by Protein ID:ENSP00000332389
Original member Current member NCBI NM_182563.4 NP_872369.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182563.4Link to Protein Sequence:NP_872369.2Re-query CCDS DB by Nucleotide ID:NM_182563Re-query CCDS DB by Protein ID:NP_872369Link to BLAST:NP_872369.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872369.2 228 Q6PL45-2 228 100% 0 0

Chromosomal Locations for CCDS 10463.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 2209362 2209456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2209553 2209706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2209950 2210051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2210126 2210281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2210522 2210650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2210783 2210833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGGAACCAGCAAGCTGCTGTGCTGAGCGCCCCAAACCTGGGCCTACAGGGGTGAAGACCAAGCCCTCCT
GCGGGGGCTGGAGAGCCGTGAGCCTGCTCCTGCTGCTGCTGCTGCTGGTGCTGGCCGCTGTGGGGGTTGT
GGCTGGAGGGCTTCTTGGCTCTGCTCAGGGCCCTCCCAAGCCAAGGCTGCAGACGCTGCGAATGACCCTC
CCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGGCGACCATCA
CAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGGTGCTGTTCGACGGGCAGAGCGGCTGCATCTGTTA
CCGCCCTGAGGAGCACCAGGTCTGCTTCCTCCGCCTGATGGAGGACAGTGATCGGGAGACCCTGCGGCTG
CTGGTGGATACCTCCAAGGTCCAAGAGGCTTGGGTCCCCAGCCAGGACACCCACCACACCCAGGAGCTGC
TGGCAGTGCAGGGGAGCCTCGAAGTGGACCCCGCCCAGGCGGGGGCTTTGGTGCAGCGCCTGTGCATGAG
GACCCCCATCTACTGGGCCCGGCGAGCAGAGGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCATCGAC
ATCTGCTTCCCGAGCAACATCTGCGTGTCGGTCTGCTTTTATTACCTCCCAGACTGA

Translation (228 aa):
MEPASCCAERPKPGPTGVKTKPSCGGWRAVSLLLLLLLLVLAAVGVVAGGLLGSAQGPPKPRLQTLRMTL
PSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCICYRPEEHQVCFLRLMEDSDRETLRL
LVDTSKVQEAWVPSQDTHHTQELLAVQGSLEVDPAQAGALVQRLCMRTPIYWARRAEGPRRQRLIYLCID
ICFPSNICVSVCFYYLPD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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